Pairwise Alignments

Query, 200 a.a., class I SAM-dependent methyltransferase from Methanococcus maripaludis S2

Subject, 338 a.a., ribosomal RNA small subunit methyltransferase from Agrobacterium fabrum C58

 Score = 46.6 bits (109), Expect = 5e-10
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 33  GVFSPKKIDKGTIILVEELELSKDDDVLDVGCGYGVIGISIADEVNSVTMTDL---NNRS 89
           G+FS  ++D G+ +L   L    D +  D G G+G + I +A++       DL   +  +
Sbjct: 171 GMFSHDRVDDGSELLASRLPTDFDGNAADFGAGWGYLSIMLAEKSPRTARIDLFEADWNA 230

Query: 90  VGLTRKNIKLNGKSEKNIEVFQGDLFEKVNNKKYSVIISNPPIKA 134
           +   + N+ L          F  DL  +   +KY +II NPP  A
Sbjct: 231 LEFAKTNL-LENNPRLTARFFWQDLANEPPKEKYDLIIMNPPFHA 274