Pairwise Alignments

Query, 264 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 273 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 22/252 (8%)

Query: 30  STEDNSWKNVEESGVLKVGLCAAWPPFESRNEKTGEIEGFDVDLANALGEELGIEVEIVD 89
           +T D   KN E  GVL      ++PPF   NE+  +++GFDVD+A A+ ++LG+++ +  
Sbjct: 24  ATLDRIEKNKELVGVLM----ESYPPFSFLNEQN-QLDGFDVDVAKAVAQKLGVKLRLET 78

Query: 90  AEWQALLGGLSKGDYDTLITCMSKKEASVENVEMSEVYYELNDVIVVRNDNNEINNVSDL 149
             W  +  G   G YD  I  M+  +A  E  +    YY    VIVV   ++ I++  DL
Sbjct: 79  PSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPAVIVVNAKDDRIHSAKDL 138

Query: 150 SGKIVGVQLGSGSEQAVD---ALSGIK-----------EIKRYNYNPEAMIDL---QNNR 192
           SGK VG+   S  E  ++    + G +           +I  Y+ +  A  DL      R
Sbjct: 139 SGKKVGLTSASSYESYLNKNLVIEGAEDTQLQYPFEDVQIAPYDTDNVAFQDLGLGAGVR 198

Query: 193 SDAVVVGYTYVLSEISKYPDLKVLDTPIASAEIVMVQKEGAKELTVKLNEALSKIKENGK 252
            DA++         +++    K+   P+ S    +  ++G  +   K+ E  +++K++G 
Sbjct: 199 LDAILTNLVTAQPRLTQDKRFKLAGEPLYSEPNSVAIEKGDPQWDSKVREVFAQLKQDGT 258

Query: 253 YDEIQDKWLSLE 264
             ++  KW+  +
Sbjct: 259 LSKLSQKWIGAD 270