Pairwise Alignments

Query, 264 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 266 a.a., Amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 89.7 bits (221), Expect = 6e-23
 Identities = 64/263 (24%), Positives = 122/263 (46%), Gaps = 19/263 (7%)

Query: 3   NKVLILIIGLIGAVLAFSGCVSNSEAQSTEDNSWKNVEESGVLKVGLCAAWPPFESRNEK 62
           +++L+ +  L+    A +G + ++  +             G L+VG+   + PF+  N K
Sbjct: 7   SRLLVGVTALVAVTAAQAGAIDDAVKR-------------GTLRVGMDPTYMPFQMTN-K 52

Query: 63  TGEIEGFDVDLANALGEELGIEVEIVDAEWQALLGGLSKGDYDTLITCMSKKEASVENVE 122
            GEI GF+VD+  A+ + +G++ E V   +  ++  L    +D + + M+  +     + 
Sbjct: 53  RGEIIGFEVDILKAMAKSMGVKFEAVSTAYDGIIPALLTDKFDMIGSGMTLTQERNLRLN 112

Query: 123 MSEVYYELNDVIVVRND-NNEINNVSDLSGKIVGV--QLGSGSEQAVDALSGIKEIKRYN 179
            SE +  +   +++R +   EI +  DL+ +   +  +LG+  E     L    +   Y+
Sbjct: 113 FSEPFIVVGQTLLIRKELAGEIKSYKDLNNEKYRLTSKLGTTGEMVSKKLISKAKYHGYD 172

Query: 180 YNPEAMIDLQNNRSDAVVVGYTYVLSEISK--YPDLKVLDTPIASAEIVMVQKEGAKELT 237
              EA++D+ N ++DA V    Y +  + K     L  LD P     +    K+G  +  
Sbjct: 173 NEQEAVMDVVNGKADAFVYDAPYNVVAVDKAGAGKLLFLDEPFTYEPLAFGLKKGDYDSI 232

Query: 238 VKLNEALSKIKENGKYDEIQDKW 260
             +N  L +IK +G YD I DKW
Sbjct: 233 NFINNFLHQIKHDGTYDRIHDKW 255