Pairwise Alignments

Query, 264 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score = 89.4 bits (220), Expect = 7e-23
 Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 11/230 (4%)

Query: 45  LKVGLCAAWPPFESRNEKTGEIEGFDVDLANALGEELGIEVEIVDAEWQALLGGLSKGDY 104
           LK+G+ AA+PPF  + +  G I GFD D+ NAL EE+  +   V+ E+  L+  L     
Sbjct: 26  LKIGIEAAYPPFAFK-QPDGSIAGFDYDIGNALCEEMKTKCTWVEQEFDGLIPALKVRKI 84

Query: 105 DTLITCMSKKEASVENVEMSEVYYELNDVIVVRNDNNEINNVSDLSGKIVGVQLGSGSEQ 164
           D +++ MS  +   ++V+ ++ YY     +V+++     +++ +L GK +GVQ GS  ++
Sbjct: 85  DAILSSMSITDDRKKSVDFTKRYYLTPARLVMKDGTTVSDSLDELKGKKIGVQRGSIHDR 144

Query: 165 AVDALSGIK--EIKRYNYNPEAMIDLQNNRSDAVVVGYTYVLSEISK--------YPDLK 214
               + G K   +  Y    E  +D+   R D  V   T +     K        +    
Sbjct: 145 FAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGTVADATLLEDGFLKTDAGKGFAFVGPA 204

Query: 215 VLDTPIASAEIVMVQKEGAKELTVKLNEALSKIKENGKYDEIQDKWLSLE 264
             D       I +  ++G K    ++N A+  I+ NGKY EI+ K+ + +
Sbjct: 205 FTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIRANGKYKEIESKYFNFD 254