Pairwise Alignments

Query, 330 a.a., 3-isopropylmalate dehydrogenase from Methanococcus maripaludis S2

Subject, 357 a.a., D-malate dehydrogenase [decarboxylating] from Xanthobacter sp. DMC5

 Score =  211 bits (537), Expect = 2e-59
 Identities = 130/352 (36%), Positives = 196/352 (55%), Gaps = 30/352 (8%)

Query: 2   HKICVIEGDGIGKEVVPAAVEVLKATGVEFEFN-----HALAGDEVFEKTGVALPEETIA 56
           ++I VI GDGIGKEV+P  V VL+     + F+     H  A  + + + G  +P +   
Sbjct: 6   YRIAVIPGDGIGKEVMPEGVRVLEKAAALYGFSLDLNWHDFACCDYYARHGEMMPADWKE 65

Query: 57  AAKAADAILFGAAG--ETAADVI------VKLRKILDTYANIRPVKSYNGINCLKTG--- 105
               +DAILFGA G  +T  D +      ++ R+  D Y N+RPV+   G+     G   
Sbjct: 66  RVGTSDAILFGAVGWPDTVPDHVSLWGSLLQFRREFDQYVNLRPVRLMPGVPSPLVGRKP 125

Query: 106 --IDYIIVRENTEGLYKGIEAEIADGVT----VATRVITKDASERIFKHAFEMAKDRKKQ 159
             ID+ +VRENTEG Y  I   +  G +    +   V+++   +R+ K AFE+A  R  +
Sbjct: 126 GDIDFWVVRENTEGEYTSIGGRMYPGTSRELVIQETVMSRHGVDRVLKFAFELAMRRPNR 185

Query: 160 GTAGKVTCAHKANVLKITDGLFKKTFYEVSNDYKDIQTEDFYVDAMNMFIISRPETFDIV 219
                +T A K+N + IT   + +    ++  Y +++T+ +++D +    +  P+ FD+V
Sbjct: 186 ----HLTSATKSNGIAITMPYWDERVEAMAASYPEVRTDKYHIDILTAQFVLHPDRFDVV 241

Query: 220 VTSNLFGDILSDGAVGMVGGLGMAPSGNVGDKY---GLFEPIHGSAPDIAGKGLANPTAT 276
           V SNLFGDILSD      G +G+APSGN+        LFEP+HGSAPDIAGKG+ANP   
Sbjct: 242 VASNLFGDILSDLGPACTGTIGIAPSGNINPDRTFPSLFEPVHGSAPDIAGKGVANPVGQ 301

Query: 277 ILTAVMMLRYLKENEAAEKVEKALEEVLSLGL-TTPDLGGTLSTSEMGQEVA 327
           I +A MML +L E +AA  +E+A+E VL+     T D+GGT +T   G+ +A
Sbjct: 302 IWSAAMMLEHLGEMDAAAAIERAIERVLAEPAGRTADIGGTANTLSCGKAIA 353