Pairwise Alignments

Query, 330 a.a., 3-isopropylmalate dehydrogenase from Methanococcus maripaludis S2

Subject, 360 a.a., D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) from Variovorax sp. SCN45

 Score =  222 bits (565), Expect = 1e-62
 Identities = 132/355 (37%), Positives = 201/355 (56%), Gaps = 33/355 (9%)

Query: 2   HKICVIEGDGIGKEVVPAAVEVLKATG----VEFEFNHALAGDEVFEKTGVALPEETIAA 57
           H+I VI GDGIG EV+P  + VL A G    ++F ++H   G + + +TG+ +P +    
Sbjct: 5   HRIAVIPGDGIGVEVMPEGLRVLDAVGRRFGIDFSYDHFDWGSDHYVRTGLMMPADWADK 64

Query: 58  AKAADAILFGAAGE--------TAADVIVKLRKILDTYANIRPVKSYNGINC----LKTG 105
            +  DAI FGA G             +++K+R+  D Y N+RPV+   G+       K G
Sbjct: 65  IQGHDAIYFGAVGAPDKVPDHIAVWGLLIKIRRDFDQYVNLRPVRLMPGVPGPLAHRKPG 124

Query: 106 -IDYIIVRENTEGLYKGIEAEIADG----VTVATRVITKDASERIFKHAFEMAKDRKKQG 160
            ID+++VRENTEG Y  +   + +G    + +   V T+   +RI  +AF +A  RK++ 
Sbjct: 125 DIDFLVVRENTEGEYTSVGGRLFEGTPREMAIQEAVFTRTGVDRIIDYAFTLANRRKRKS 184

Query: 161 TAGKVTCAHKANVLKITDGLFKKTFYEVSNDYKDIQTEDFYVDAMNMFIISRPETFDIVV 220
               +T A K+N + IT   + +   E++  Y D+ T  F++D +    +  P+ FD+VV
Sbjct: 185 ----LTAATKSNGISITMPYWDERLAEIAKRYPDVATNKFHIDILCAHFVQHPDWFDVVV 240

Query: 221 TSNLFGDILSDGAVGMVGGLGMAPSGNVGDKY---GLFEPIHGSAPDIAGKGLANPTATI 277
            SNLFGDILSD      G +G+APS N+  +     LFEP+HGSAPDIAGKG+ANP   I
Sbjct: 241 ASNLFGDILSDLGPACTGTIGIAPSANLNPERKFPSLFEPVHGSAPDIAGKGIANPIGQI 300

Query: 278 LTAVMMLRYLKEN-----EAAEKVEKALEEVLSLGLTTPDLGGTLSTSEMGQEVA 327
            +A +ML +L  +     +A+  V  A+E VLS G  T D+GGT +T ++G+ +A
Sbjct: 301 WSAALMLDHLGNDDPVYAQASAAVVSAIETVLSEGPRTRDMGGTANTVDVGRAIA 355