Pairwise Alignments

Query, 356 a.a., DUF123 domain-containing protein from Methanococcus maripaludis S2

Subject, 315 a.a., Endonuclease III from Xanthobacter sp. DMC5

 Score =  107 bits (268), Expect = 3e-28
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 1/169 (0%)

Query: 38  AFKILISTVISARTKDETTAKVSKELFKKVKNPKDLVQIPIDELEKLVHPAGFYKTKAKN 97
           AF +L++ V+SA+  D    K +K LF     P  +  +  D++   +   G ++ KAKN
Sbjct: 134 AFTLLVAVVLSAQATDTGVNKATKGLFAAASTPAAMAALGEDQVAHHIRTLGLFRGKAKN 193

Query: 98  LKKLGEILIDKYNSNVPNSIEELVTLPGVGRKTANLVMTLAFDDYAICVDTHVHRITNRW 157
           + +L  +L++++   VP   E L  LPGVGRKTAN+V+ +AF    I VDTH+ R+ NR 
Sbjct: 194 VVELSRLLLERHAGVVPQDREALEALPGVGRKTANVVLNIAFGVPTIAVDTHLFRVANRT 253

Query: 158 YYADTESPENTEMDLRKKLPKNYWKKINNLLVVFGQETCSPI-PKCDKC 205
             A   +P   E+ L  ++P  +    ++ L++ G+  C    P C +C
Sbjct: 254 GLAPGATPLAVELGLEARIPDRFKLHAHHWLILHGRYICKATKPACSRC 302