Pairwise Alignments

Query, 356 a.a., DUF123 domain-containing protein from Methanococcus maripaludis S2

Subject, 212 a.a., DNA glycosylase/apyrimidinic (AP) lyase specific for damaged pyrimidinic sites from Pseudomonas putida KT2440

 Score =  112 bits (279), Expect = 1e-29
 Identities = 59/178 (33%), Positives = 103/178 (57%), Gaps = 3/178 (1%)

Query: 39  FKILISTVISARTKDETTAKVSKELFKKVKNPKDLVQIPIDELEKLVHPAGFYKTKAKNL 98
           F++L++  +SA++ D    K +  LF     P+ +  + ++ L + +   G Y +KAKN+
Sbjct: 30  FELLVAVTLSAQSTDVGVNKATARLFPVANTPEAIYALGVEGLSEYIKTIGLYNSKAKNV 89

Query: 99  KKLGEILIDKYNSNVPNSIEELVTLPGVGRKTANLVMTLAFDDYAICVDTHVHRITNRWY 158
            +   +LI++++S VP + E L  LPGVGRKTAN+V+  AF   A+ VDTH+ R++NR  
Sbjct: 90  IEACRLLIERHDSQVPQTREALEALPGVGRKTANVVLNTAFRQPAMAVDTHIFRVSNRTG 149

Query: 159 YADTESPENTEMDLRKKLPKNYWKKINNLLVVFGQETC-SPIPKCDKCFSEIKKICPH 215
            A  ++    E  L K +PK+Y    ++ L++ G+  C +  P+C  C   I+ +C +
Sbjct: 150 IAPGKTVLEVEKKLLKFVPKDYLLDAHHWLILHGRYVCQARKPRCGSC--RIEDLCEY 205