Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 286 a.a., small-conductance mechanosensitive channel MscS from Escherichia coli ECRC62

 Score =  129 bits (323), Expect = 1e-34
 Identities = 63/218 (28%), Positives = 125/218 (57%), Gaps = 5/218 (2%)

Query: 131 RLKATVFHYSAMIIAFGIV-FQMLGLTSKLG----TLLVAGGITGIILGFASQTVVANFI 185
           ++ ATV  + + ++ +GI+ F ++    ++G    +++   G  G+ +G A Q  ++N  
Sbjct: 60  KIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLA 119

Query: 186 SGIFLYFDKPLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVNNK 245
           +G+ L   +P + G+ V +G  +G V  +++ ST +RT DG ++ IPN K+    I+N  
Sbjct: 120 AGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFS 179

Query: 246 KYPARRVDIVVGIAYKEDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSSVDISVKA 305
           + P RR + ++G+AY  D  +   I++ I+++   +L + E  + +N+LG SS++  V+ 
Sbjct: 180 REPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKDREMTVRLNELGASSINFVVRV 239

Query: 306 WTPSEKWYDVKMELVKNIKKEFDKEKVEIPFPQRTVWF 343
           W+ S    +V  ++++ IK+EFD   +  P+PQ  V F
Sbjct: 240 WSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVNF 277