Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 294 a.a., small-conductance mechanosensitive channel MscS from Dickeya dadantii 3937

 Score =  123 bits (308), Expect = 7e-33
 Identities = 75/295 (25%), Positives = 150/295 (50%), Gaps = 38/295 (12%)

Query: 52  QTWILNEETAGLISTFVLAIFVVLALNVIESFVTYQLFGFDLKILTYSLLIIYFTYRISN 111
           Q+W++N +           I +  A+N++ S V          IL   +++      +SN
Sbjct: 14  QSWLVNNQH----------ILLQYAVNIVASLV----------ILCVGMVVARI---MSN 50

Query: 112 RSKRYLLLKGSQEGKFAEYRLKATVFHYSAMIIAFGIV-FQMLGLTSKLG----TLLVAG 166
              R ++ +G          +  TV  + + ++ +GI+ F ++   S++G    +++   
Sbjct: 51  TMSRLMVARG----------IDITVADFLSALVRYGIIAFTLIAALSRVGVQTASVIAVL 100

Query: 167 GITGIILGFASQTVVANFISGIFLYFDKPLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDG 226
           G  G+ +G A Q  ++NF +G+ L   +P + G+SV +G  +G V  +++ ST + T DG
Sbjct: 101 GAAGLAVGLALQGSLSNFAAGVLLVVFRPFRTGESVDLGGVAGTVTQVQIFSTTLLTADG 160

Query: 227 VLVRIPNEKVFNSEIVNNKKYPARRVDIVVGIAYKEDAQRAMDIISKILENMTYVLVEPE 286
            ++ +PN K+    I+N+ + P RR +I+VG+AY  D      ++  I+   T +  +  
Sbjct: 161 KVIVVPNGKIIAGNIINSSREPDRRTEIIVGVAYDADIDVVKTVLGDIVAADTRIQQDKG 220

Query: 287 FQIFVNDLGNSSVDISVKAWTPSEKWYDVKMELVKNIKKEFDKEKVEIPFPQRTV 341
             I +N++G SS++  V+ WT +     V  +L+++ K+  D+ ++ IP+PQ  V
Sbjct: 221 VTIRLNEMGASSLNFVVRVWTSNGDAAAVYWDLLESFKRALDEHRIGIPYPQMDV 275