Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 417 a.a., Small-conductance mechanosensitive channel from Alteromonas macleodii MIT1002

 Score =  118 bits (295), Expect = 3e-31
 Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 4/214 (1%)

Query: 140 SAMIIAFGIVFQML--GLTSKLGTLLVAGGITGIILGFASQTVVANFISGIFLYFDKPLK 197
           S ++I  GI   +   GLT     ++   G+ G+ILGFA + +  NFIS + L   +P +
Sbjct: 110 SLVLILLGIYLFLFLAGLTGFAIAVVSGTGVVGLILGFAFRDIAENFISSLLLTIQRPFR 169

Query: 198 IGDSVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVNNKKYPARRVDIVVG 257
           IGD VQI   +GI+  +   +T +  +DG  ++IPN  ++   I N    P  R   V+G
Sbjct: 170 IGDIVQINDFTGIIQKVTARATTLVDFDGNHIQIPNATIYKGVIKNLTANPLMRGQFVIG 229

Query: 258 IAYKEDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSSVDISVKAWTPSEKWYDVKM 317
           + Y  D Q+A  I  +I      VL++PE QI +++LG S+ +I V  W   EK   +KM
Sbjct: 230 VGYDADIQQAQQIAQEITSAQDNVLIDPEPQILIDELGPSTYNIKVYFWVDVEKTSVLKM 289

Query: 318 E--LVKNIKKEFDKEKVEIPFPQRTVWFPQDLKV 349
              L++ I + F +  + +P   R   FP+ + +
Sbjct: 290 ASVLMRKITQAFLEANISMPDDARERIFPEGMHI 323