Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 671 a.a., Macrolide export ATP-binding/permease protein MacB from Xanthobacter sp. DMC5

 Score =  140 bits (353), Expect = 1e-37
 Identities = 116/415 (27%), Positives = 197/415 (47%), Gaps = 35/415 (8%)

Query: 7   FNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTAS 66
           F MA   + + +LR+++T+LGI+IGIASV+ +++ G+     V   ++ + ++ + + A 
Sbjct: 280 FIMALLAMNAHRLRTFLTMLGIIIGIASVVCVVALGEGSRQKVLANISSLGTNTLEIFAG 339

Query: 67  AAQGSDDDEDPELTDMDVLILNGISDIEYVDV---RVSTRNEVRFAGGRETATITGVDPA 123
              G  D    ++T + V   + ++   YV      VS    VRF G   +A I GV   
Sbjct: 340 RTFG--DTRSGKITTLVVADADALARQHYVAAVTPTVSKSTTVRFGGTEASALINGVGDG 397

Query: 124 VWSQMTDEELSAGRLLQASDSNA----VIISYYTATEAFDREIG--INQMITIGNKQFKV 177
            ++      L+ GRL  A    A     +I   T    F    G  + ++I IG+   +V
Sbjct: 398 YFAAK-GVRLTQGRLFDADSVRARTLEAVIDENTRKTLFADVPGGPLGKVILIGDVFARV 456

Query: 178 VGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYE 237
           VG+    +  GFG    +S   VY+PY +V +  +  ++  SI+ K           + +
Sbjct: 457 VGVAAPQQG-GFGSSQNLS---VYLPYTSVQSRFVGSNSLRSITVK-----------VAD 501

Query: 238 DVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIV 297
           D     A + + +  +  RH  +D   F I +  +          +T  ++ IA ISLIV
Sbjct: 502 DAPMDVAEQQVTR-FLTQRHGTKDF--FIINTDDIRNTITATTETMTVLIAAIAVISLIV 558

Query: 298 GVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILS 357
           G  G+ N M  +V E+  EIG+  A+GA+  DI+  F+  + ++ LVGG  G+ L     
Sbjct: 559 GGIGVMNIMLVSVSERVGEIGVRMAVGARQSDILNQFLIEAVLVCLVGGVTGIALALGFG 618

Query: 358 QIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEAL 412
            +  +       S++  + S  S++ A+ CS   G+  G +PA NAS+L PV AL
Sbjct: 619 VLFAY-----SGSNFTLIYSASSIIAAVVCSSLIGVGFGYLPARNASRLDPVTAL 668