Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 656 a.a., macrolide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  131 bits (329), Expect = 7e-35
 Identities = 112/407 (27%), Positives = 193/407 (47%), Gaps = 37/407 (9%)

Query: 17  SKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASAAQGSDDDED 76
           ++ R+ +T+LGI+IG+ASV+ +++ G+     V  Q+    S+ I L+ +    S +   
Sbjct: 279 NRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYLSGT----SPNPRT 334

Query: 77  PE--LTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAVWSQMTDEELS 134
           P   +T  DV  L  +  ++ +     +   VRF+     A + G D   + ++ +  + 
Sbjct: 335 PLGIVTLDDVHALAALPQVQRIMPVNGSEVGVRFSNVDYMAYVGGNDTN-FPEIFNWPVV 393

Query: 135 AGRLLQASDSNAV----IISYYTATEAFDREIG-INQMITIGNKQFKVVGILEEDETQGF 189
            G    A+D  A     +I +    + F  E+  I Q I I N  F+V+G+L E   +G 
Sbjct: 394 EGNYFTAADERAAATVAVIGHRVREKLFKGEVNPIGQYILIENVPFQVIGVLAE---KGA 450

Query: 190 GQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYD-EIIFTLYEDVNQTTALENI 248
                 S + V +PY A              S +  G Y+ E +     D  +    E  
Sbjct: 451 ASGNKDSDDRVAIPYTAA-------------SVRLFGNYNPEYVVIAAADARKVRETEVA 497

Query: 249 QKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIVGVTGISNTMFT 308
             +LM   H  + + + T  +  + +   +  + L+  L  IA ISL+VG  G+ N M  
Sbjct: 498 IDQLMQKLHNGKRDYELT-NNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVMNIMLM 556

Query: 309 TVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQIIVWFIAQSM 368
           TV E+TREIGI  A GA+ +DI+  F+  + ++ +VGG  G+ L  ++  ++V       
Sbjct: 557 TVRERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLCGIALALLVGGVLVL------ 610

Query: 369 DSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
            +      S+ +V  A GC+L  G++ G +PA  A++L PV+AL SE
Sbjct: 611 -AKVAVQFSLLAVFGAFGCALVTGVVFGFMPARKAARLDPVKALTSE 656