Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  121 bits (304), Expect = 3e-32
 Identities = 106/419 (25%), Positives = 181/419 (43%), Gaps = 38/419 (9%)

Query: 5   KLFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLT 64
           +L + A   +++   RS + +LGIVIG +SV+A+I+ G   +   +    DM +D + + 
Sbjct: 17  QLLHEAFVSLRTLGKRSILALLGIVIGSSSVVALINIGHNAAVDAAMIFKDMGTDTL-IA 75

Query: 65  ASAAQGSDDDEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAV 124
               +G+     P   D+D  +   +  I +V         + F G    A + G  P +
Sbjct: 76  QFPPKGASTVPMPARLDLDA-VRQTVPGIAHVGALTLFSGPIVFHGRTVNANLVGSTPDI 134

Query: 125 WSQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIG-------INQMITIGNKQFKV 177
              M    L  GR L   D+N    +Y    +   + +G       +   + I +  F +
Sbjct: 135 KDAMR-LALQQGRFLSGFDANE---TYGVIGDQVAQSLGAPGDPLRLGDRVRINDYLFLI 190

Query: 178 VGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYE 237
           VGIL          M   ++ ++++P E +  +         I     G           
Sbjct: 191 VGILRSQPRAML--MPVQANESLFIPAEGMRRIYATPQIGNLIIRAAPG----------- 237

Query: 238 DVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPT-VFEGPEQIISMLTTFLSFIAGISLI 296
                  +E I K + ++      + D  I+ P  + +G  +        L  +  ISL+
Sbjct: 238 -----QDMERIAKNVAVALQPQLTDHDVDIQVPQQMIDGMTRQSRTFAYLLLALGAISLV 292

Query: 297 VGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTIL 356
            G  G+ N M   V E+ REIGI  A+GA+ +DI  LF+  +  +  VG   G VLG   
Sbjct: 293 GGGVGVMNVMLMNVSERRREIGIRMALGARQRDIRNLFLLEAVTLTAVGALCGAVLGLTA 352

Query: 357 SQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
           + +  W       S ++F L+I ++ + +G +L  G+  GI PA +AS+L+PVEALR E
Sbjct: 353 AWLYAWL------SGWEFALAIAALPLGVGSTLLVGLFFGIYPAVSASRLQPVEALRDE 405