Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 418 a.a., Lipoprotein releasing system transmembrane protein LolC/LolE from Variovorax sp. SCN45

 Score = 63.9 bits (154), Expect = 8e-15
 Identities = 84/414 (20%), Positives = 179/414 (43%), Gaps = 44/414 (10%)

Query: 21  SWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASAAQGSDDDEDPELT 80
           S +++LGI +G+A++I ++S  +     V D++  ++S  I + +   Q         L 
Sbjct: 30  SGVSMLGIALGVAALIIVLSVMNGFQKEVRDRMLGVVS-HIEIFSRDGQA--------LP 80

Query: 81  DMDVLILNGISDIEYVDVRVSTRNEVRFAGGRET--ATITGVDPAVWSQMTDEELSA--G 136
            ++ ++       E +        +   A G +     + G+DP +  ++TD    A  G
Sbjct: 81  QLEEIMAAARKHPEVIGAAPFINTQALIARGEDMKGTVVRGIDPKLEPEVTDTNSIAAHG 140

Query: 137 RLLQASDSNAVIISYYTATEAFDREIGINQMITIGNKQFKVVGILEEDETQGFGQMGGMS 196
              +       I+       +   + G    +     Q    G++     + F  +G   
Sbjct: 141 TFDKLVPGEFGIVLGAELARSLFVQPGDKVTLVAPGGQVTPAGVVPR--LKQFTVVGTFD 198

Query: 197 SNTVYMPYEAVYTLELDDDASYSIS-EKEEGVYDEIIFTLYEDVNQTTALENIQKKLMMS 255
           S   +  Y++   +  + DA+     E   G+  ++     +D+N+     ++  +L +S
Sbjct: 199 SG--HYEYDSALAMVHEQDAAKVFRLEGPTGIRLKL-----KDLNEA---RDVADQLAVS 248

Query: 256 RHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIVGVTGISNTMFTTVLEKTR 315
                   D+T ++ T F   +    M+   L+ I  ++       + +T+  TV +K  
Sbjct: 249 LPGEFLIRDWTRQNKTWFAAVQVEKRMMFIILTLIVAVAAF----NLVSTLVMTVTDKRA 304

Query: 316 EIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILS---QIIVWFIAQSMDSSY 372
           +I I++ +G+  + IM +FV   A++G++G   GL+LG  ++    +IV F+     +S+
Sbjct: 305 DIAILRTLGSSPRSIMGIFVVQGAMVGVIGTVAGLLLGLGIAFNIDVIVPFLEHLFHASF 364

Query: 373 Q----FVLSI------KSVVIAIGC-SLAAGIIAGIIPAYNASKLKPVEALRSE 415
                +++S       +S ++ I   SL    +A + P++ AS++ P EALR E
Sbjct: 365 LPKDIYLISKMPSDPQQSDIVPIAIISLVLSFVATLYPSWRASRVNPAEALRYE 418