Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 669 a.a., Macrolide export ATP-binding/permease protein MacB from Variovorax sp. SCN45

 Score =  156 bits (395), Expect = 2e-42
 Identities = 120/419 (28%), Positives = 207/419 (49%), Gaps = 38/419 (9%)

Query: 7   FNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTAS 66
           F MA + + + ++R+ +T+LGI+IGI SV++I++ G+     V   +  + ++    T  
Sbjct: 279 FRMAWRSMMAHRMRTALTMLGIIIGITSVVSIVAIGEGAKRFVLSDIKAIGTN----TLD 334

Query: 67  AAQGSDDDEDPE-----LTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVD 121
              GSD  +D       LT  D+  L     +  V    S    +R+       ++ GV 
Sbjct: 335 VYPGSDFGDDKAASIRTLTPSDLDALAAQPYVHSVTPSTSRNLRLRYRSVDINGSVNGVS 394

Query: 122 PAVWSQMTDEELSAGRLLQASD----SNAVIISYYTATEAFDREIG-INQMITIGNKQFK 176
            + + ++ D ++++G    ASD    S  V+I   T  + F      + ++I +GN    
Sbjct: 395 DSFF-RVRDIQMASGAAFTASDVRHQSQVVVIDQNTRRKLFPEGTDPLGKIILVGNLPCT 453

Query: 177 VVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLY 236
           V+G+ +E +       G   S  +++PY           AS    ++    +D I   + 
Sbjct: 454 VIGVSQEKKNM----FGENKSLNIWLPYST--------GASRLFGQQH---FDSITVRIR 498

Query: 237 EDVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLI 296
           +D   T A E+   KL+  RH ++D   FT    ++ +  E+    LT  LS IA ISL+
Sbjct: 499 DD-QPTKAAEDSVVKLLTMRHGSKDF--FTFNMDSIVKTAERTSQSLTLLLSLIAVISLV 555

Query: 297 VGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTIL 356
           VG  G+ N M  +V E+TREIGI  A+GA+  D++  F+  + ++ LVGG +G+ L   +
Sbjct: 556 VGGIGVMNIMLVSVTERTREIGIRMAVGARQSDVLQQFLTEAVLVCLVGGLIGVTLSYGI 615

Query: 357 SQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
           S +   F+ Q     +Q + S+ +VV A  C+   G++ G +PA NA++L P+EAL  E
Sbjct: 616 SFLFSLFVKQ-----WQMIFSMGAVVSAFLCASLIGVLFGYLPARNAARLDPIEALARE 669