Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 653 a.a., ABC transporter:Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  150 bits (380), Expect = 8e-41
 Identities = 118/413 (28%), Positives = 198/413 (47%), Gaps = 32/413 (7%)

Query: 7   FNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTAS 66
           F MA   + S ++R+ +T+LGI+IGI SV++I++ G+     V   +  + S+ I +   
Sbjct: 263 FVMAWVALISHRMRTLLTMLGIIIGITSVVSIVAIGEGAKRYVLKDIQAIGSNTIEVFPG 322

Query: 67  AAQGSDDDEDPE-LTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAVW 125
           +  G     D + L   DV  L+    I+     +     VR+     +AT++GV P+ +
Sbjct: 323 SDFGDTKSMDIQTLALSDVAALSSEYYIDSATPNIGRNLLVRYRNIDVSATVSGVSPSYF 382

Query: 126 SQMTDEELSAGRLLQASDSN----AVIISYYTATEAFDREIG-INQMITIGNKQFKVVGI 180
            Q+   ++  G      D+      V+I + T    F  ++  + Q+I +GN    V+G+
Sbjct: 383 -QVRGTKMGLGVGFNKDDARRQAQVVVIDHNTRIRLFGPKVDPLGQVILVGNLPCTVIGV 441

Query: 181 LEEDETQGFGQMGGMSSN-TVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYEDV 239
            E  +      +   S N  ++MPYE      L               Y + I    +D 
Sbjct: 442 TENKKN-----IFDTSKNLNIWMPYETASGRLLGQ------------TYLDGITVRVKDG 484

Query: 240 NQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIVGV 299
             +  +E+   KL+  RH  +D   FT    +V +  ++    L   LS IA ISL VG 
Sbjct: 485 QPSKVVEDNVNKLLQKRHGTKDF--FTYNLDSVMQTVQKTSQSLALLLSLIAVISLAVGG 542

Query: 300 TGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQI 359
            G+ N M  +V E+TREIGI  A+GA+  DI   F+  + ++ L+GG +G+ L       
Sbjct: 543 IGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVCLIGGVIGISL-----SF 597

Query: 360 IVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEAL 412
           ++ ++   +   +Q V S+ S+V A  CS   GI+ G +PA NA++L P+EAL
Sbjct: 598 VIGYVFSLLVKEWQMVFSLGSIVTAFICSTLIGIVFGFVPARNAAQLDPIEAL 650