Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 654 a.a., pyoverdine efflux carrier and ATP binding protein from Pseudomonas putida KT2440

 Score =  117 bits (294), Expect = 8e-31
 Identities = 104/418 (24%), Positives = 189/418 (45%), Gaps = 33/418 (7%)

Query: 4   LKLFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITL 63
           L+    A +++  ++ R+ +T+LGI+IG+ASV+ +++ G+     V  Q+    S+ + L
Sbjct: 264 LESLQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMAAFGSNILYL 323

Query: 64  TASAAQGSDDDEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVD-- 121
             S    +  +    +T  DV  +  +  ++++   +  +  VR     +   + G +  
Sbjct: 324 NGSPP--TLREPAGRITLDDVAAIGELPQVKHIMPVLGEKMMVRHGNNSQQFYVGGNNTF 381

Query: 122 -PAVWSQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIG-INQMITIGNKQFKVVG 179
            P +++    E        +AS +   +I      +        I Q + IGN  F+VVG
Sbjct: 382 FPEIFNWPAVEGSFFTETDEASSAAVAVIGQKVREKMLAPGSNPIGQYLLIGNVPFQVVG 441

Query: 180 ILEEDETQGFGQMGGM--SSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYE 237
           IL      G G   G   S   + +P+ A         A+  +    +  Y   I     
Sbjct: 442 ILA-----GKGASSGDQDSDGRIVVPFSA---------AAIRLFGHRDPDY---IAIAAR 484

Query: 238 DVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIV 297
           D  Q    E    +L+  RH  + + + T     + +   +  + L+  L  IA ISL+V
Sbjct: 485 DSGQVKDTEAAIDRLLRQRHQGKHDFELT-NDAALIQAEARTQNSLSLMLGAIAAISLLV 543

Query: 298 GVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILS 357
           G  G+ N M  TV E+TREIGI  A GA+ +DI+  F+  + ++ +VGG  G+ L  ++ 
Sbjct: 544 GGIGVMNIMLMTVRERTREIGIRMATGARQRDILRQFLSEAIMLSMVGGLTGIALALVVG 603

Query: 358 QIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
                  A    +      ++ ++V A  C++  G++ G +PA  A++L PV+AL SE
Sbjct: 604 -------ASLTLADIAVAFALPAIVGAFACAVITGVVFGFMPARKAARLDPVKALTSE 654