Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 399 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score =  119 bits (299), Expect = 1e-31
 Identities = 106/412 (25%), Positives = 181/412 (43%), Gaps = 54/412 (13%)

Query: 20  RSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASAAQGSDDDEDPEL 79
           RS + +LGIVIG +SV+A+I+ G   +   +    DM +D + +      G++    P+L
Sbjct: 26  RSVLALLGIVIGSSSVVALINIGHNAAVDAAAIFKDMGTDTLVVQFPPKGGANLPMRPQL 85

Query: 80  TDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAVWSQMTDEELSAGRLL 139
            D+   +   +  I ++         + F G    A + G  P +   M    +  GR L
Sbjct: 86  -DLQA-VRQAVPGIAHIGALTLFSGPIVFHGRSVNANVVGSTPGIQPAMR-LVMQQGRFL 142

Query: 140 QASDSNAVIISYYTATEAFDREIG-------INQMITIGNKQFKVVGILEEDETQGFGQM 192
            + D+N    +Y    +   + +G       +   + I +  F +VGIL          M
Sbjct: 143 SSFDAND---TYGVIGDQIAQALGAPGDPVQLGDRVRINDYLFLIVGILRSQPRAML--M 197

Query: 193 GGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYEDVNQTTALENIQKKL 252
              ++ ++++P E +  +      S  I     G                  +E + K  
Sbjct: 198 PVQANESLFIPAEGMRRIYATPQISNVIIRAAPG----------------QDMERLAKAA 241

Query: 253 M--MSRHVNEDNMDFTIRSPTVFEGPEQIISMLT----TF---LSFIAGISLIVGVTGIS 303
              + R + E ++D  +        P+Q+I  +T    TF   L  +  ISL+ G  G+ 
Sbjct: 242 AGALQRQLTEHDVDIQV--------PQQMIDGMTRQSRTFAYLLLALGAISLVGGGVGVM 293

Query: 304 NTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQIIVWF 363
           N M   V E+ REIGI  A+GA+ +DI  LF+  +  +  VG   G VLG   + +  W 
Sbjct: 294 NVMLMNVSERRREIGIRMALGARRRDIRNLFLIEAVTLTAVGALCGAVLGMTAAWLYAWL 353

Query: 364 IAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
                 S + F L++ ++ + +G +L  G+  GI PA +AS+L+PVEALR E
Sbjct: 354 ------SGWTFDLAVAALPLGVGSTLLVGLFFGIYPAVSASRLQPVEALRDE 399