Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  179 bits (453), Expect = 2e-49
 Identities = 125/420 (29%), Positives = 219/420 (52%), Gaps = 28/420 (6%)

Query: 1   MKPLKLFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDE 60
           M+   + + A + +   K +S++TI+G+VIGI +++++IS G  +   ++ ++  + ++ 
Sbjct: 1   MRITDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGANV 60

Query: 61  ITLTASAAQGSDDDEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGV 120
           I++  S   G          D DV  +  +  +E V        E+ +        +  +
Sbjct: 61  ISVLPSQNFGGPA-VSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSHYGNVLVI 119

Query: 121 DPA----VWSQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIGNKQFK 176
           +P+    V+S+    E   GR ++ SD  + +I Y  AT +FDREI I   ITI +K++K
Sbjct: 120 EPSKFTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIGDKITINDKKYK 179

Query: 177 VVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTL-ELDDDASYSISEKEEGVYDEIIFTL 235
           V+GILEE            + N+V +  +    L E++++ +  I     G         
Sbjct: 180 VIGILEETGNP-------RTENSVILSKDVGEELFEINNEYNMMIVSVRSG--------- 223

Query: 236 YEDVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISL 295
            EDVN  +  E I+ +L  SR   ++N    + +  + E    I  +LT FL  +AGISL
Sbjct: 224 -EDVNLVS--EEIKDELEDSR--GDENFS-VLTAEQLAESINSIFEVLTIFLVGVAGISL 277

Query: 296 IVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTI 355
           +VG  GISNTM  ++LE+ ++IGI+KA+GA+N  I+ +FV  +  +GL GG +G +LG +
Sbjct: 278 LVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFVVEAGFLGLFGGIVGTMLGIL 337

Query: 356 LSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
           +++ I +  A S     +  +S + +V  +  S   GI++G  PA + +KL PV+ LR E
Sbjct: 338 IAKAIEYIAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397