Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  186 bits (471), Expect = 1e-51
 Identities = 133/426 (31%), Positives = 229/426 (53%), Gaps = 40/426 (9%)

Query: 1   MKPLKLFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDE 60
           MKP  + + A + +   K +S +TI+GIVIGI +++++IS G  +   ++++++   +  
Sbjct: 1   MKPKDVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASV 60

Query: 61  ITLTASAAQGSDDDEDPELTDMDVLILNGISDIEYVDV---------RVSTRNEVRFAGG 111
           IT+  S  Q +         D D   L  + D+  VDV         +V+  ++  ++  
Sbjct: 61  ITVYPSQ-QITSIAMSKNFNDRD---LKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSS- 115

Query: 112 RETATITGVDPAVWSQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIG 171
              AT +      +++    EL  GR ++ SD    +I Y  A + FDREI I   I I 
Sbjct: 116 -VFATKSSTYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEIN 174

Query: 172 NKQFKVVGILEEDETQGFGQMGGMSS-NTVYMPYEAVYTL-ELDDDASYSISEKEEGVYD 229
           +K++KVVGILE        Q+G     N++ +PYEA   + ++DD+ +  + + ++G   
Sbjct: 175 DKKYKVVGILE--------QIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDG--- 223

Query: 230 EIIFTLYEDVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSF 289
                  EDV + +  E+I+ +L  SR   ++N    + +  + E    I S+LT FL  
Sbjct: 224 -------EDVTKVS--EDIEDELEDSR--GDENFS-VLTAEQLAESISSIFSVLTIFLVG 271

Query: 290 IAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLG 349
           +AGISL+VG  GISNTM  ++LE+ ++IGI+KA+GA+N  I+ +FV  +  +GL GG +G
Sbjct: 272 VAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVG 331

Query: 350 LVLGTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPV 409
            +LG ++++ I +  A S     +  +S + +V  +  S   GI++G  PA + +KL PV
Sbjct: 332 TILGILIAKAIEYVAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPV 391

Query: 410 EALRSE 415
           + LR E
Sbjct: 392 DTLRGE 397