Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 646 a.a., MacB family efflux pump subunit from Serratia liquefaciens MT49

 Score =  136 bits (343), Expect = 2e-36
 Identities = 111/417 (26%), Positives = 196/417 (47%), Gaps = 40/417 (9%)

Query: 9   MASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASAA 68
           MA K + + +LR+ +T+ GI+ GIA+V+ +++ G+       + + D+ ++ +++     
Sbjct: 260 MALKAMNAHRLRTALTMTGIIFGIAAVVTVVALGEGAKQRTLESIKDLGTNVVSIYPGRD 319

Query: 69  QGSDD-DEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAVWSQ 127
              D  D    L   D   L   S ++ V   VS    +RF      A+I+GV       
Sbjct: 320 FFDDSIDSIRTLVPADADALASQSFVDSVSPEVSASENIRFRSKSANASISGVG------ 373

Query: 128 MTDEELSAGRLLQA----SDSNAV--IISYYTATEAFDREIGIN---QMITIGNKQFKVV 178
             +  +S  +L+Q      D NA+  +I    A +A   + G+    Q++ +G    +VV
Sbjct: 374 RDNLRVSGLKLIQGRNFLDDRNALQEVIIDENARQALFGDFGVEPLGQIVFLGAVPARVV 433

Query: 179 GILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYED 238
           G+++ ++     ++       V+MPY  V    +      SI+ +           L ED
Sbjct: 434 GVVQSNQDSAPNRI------RVWMPYSTVMYRMVGKSTLSSINVR-----------LKED 476

Query: 239 VNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIVG 298
           V+   A+  I K+L+  RH  +D M F +      +  E     LT  +  +A ISLI+G
Sbjct: 477 VSNEAAVAAI-KQLLTQRHGVKDFMLFNLDKYR--KSIEHTSMTLTLLILMVASISLIIG 533

Query: 299 VTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQ 358
             G+ N M  +V E+T EIG+  A+GA+  DIM  F+  + ++ L+GG LG++L      
Sbjct: 534 SLGVMNIMLVSVTERTHEIGVRMAVGARRSDIMQQFMIEAVLVCLIGGALGILLSFAAGS 593

Query: 359 IIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
           +        + + Y    S ++  +A  CS   G+I G +PA  A+++ PV +L SE
Sbjct: 594 LFTLLAGGMLTAIY----SWQAAAVAFCCSTLIGMIFGYLPARKAARMDPVISLASE 646