Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 648 a.a., macrolide ABC transporter ATP-binding protein/permease MacB from Escherichia coli ECRC62

 Score =  140 bits (352), Expect = 1e-37
 Identities = 114/412 (27%), Positives = 198/412 (48%), Gaps = 28/412 (6%)

Query: 9   MASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASAA 68
           MA + + ++K+R+ +T+LGI+IGIASV++I+  GD     V   +  + ++ I +     
Sbjct: 260 MAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKD 319

Query: 69  QGSDDDEDPELTDMDVLI-LNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAVWSQ 127
            G DD +  +    D LI +     +      VS    +R+      A+  GV    ++ 
Sbjct: 320 FGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNV 379

Query: 128 --MTDEELSAGRLLQASD-SNAVIISYYTATEAFDREIGI-NQMITIGNKQFKVVGILEE 183
             MT  E +     Q +  +  V++   T  + F  +  +  ++I +GN   +V+G+ EE
Sbjct: 380 YGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEE 439

Query: 184 DETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYEDVNQTT 243
            ++      G      V++PY  +    +      SI+ + +  +D       E   Q T
Sbjct: 440 KQSM----FGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSA-----EAEQQLT 490

Query: 244 ALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIVGVTGIS 303
                  +L+  RH  +D   FT     V +  E+    L  FL+ +A ISL+VG  G+ 
Sbjct: 491 -------RLLSLRHGKKDF--FTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVM 541

Query: 304 NTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQIIVWF 363
           N M  +V E+TREIGI  A+GA+  D++  F+  + ++ LVGG LG+ L      +++ F
Sbjct: 542 NIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITL-----SLLIAF 596

Query: 364 IAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
             Q     ++   S  ++++A  CS   GI+ G +PA NA++L PV+AL  E
Sbjct: 597 TLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE 648