Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 648 a.a., MacB family efflux pump subunit from Dickeya dianthicola ME23

 Score =  139 bits (350), Expect = 2e-37
 Identities = 114/424 (26%), Positives = 206/424 (48%), Gaps = 49/424 (11%)

Query: 7   FNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTAS 66
           F MA + + + ++R+++T+LGI+IGIASV+++++ G      + + +N M +  + + + 
Sbjct: 259 FRMALRAMSAQRIRTFLTMLGIIIGIASVVSVVALGKGSQQQMLEHINAMGTSTLEIFSG 318

Query: 67  AAQGSDDDEDPELTDMDVLILNGISDIEY------VDVRVSTRNEVRFAGGRETATITGV 120
              G     D     +  L +N +  +E       V   VST   +R+A    + +++GV
Sbjct: 319 KDFG-----DMHSAAIQTLRVNDLRPLEQQPYIHSVTPTVSTSATLRYANKAVSVSVSGV 373

Query: 121 DP---AVWSQMTDE-----ELSAGRLLQASDSNAVIISYYTATEAFDR-EIGINQMITIG 171
                 V   +  E      LS  RL Q +     +I   T  + F   E  + Q+I +G
Sbjct: 374 GEQFFTVRGYVLSEGNGFSPLSVERLTQEA-----VIDQNTRNKLFPNGENPLGQVIFLG 428

Query: 172 NKQFKVVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEI 231
               +++G+    ++ GFG    ++   V++PY  V    +      SI+ + +      
Sbjct: 429 QLPCRIIGVATRKQS-GFGSDENLN---VWVPYTTVMRRMVGQSYLRSITVRVK------ 478

Query: 232 IFTLYEDVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIA 291
                ++++ + A + I + ++  +H N+D   F + + ++ +   Q  + +T  +S IA
Sbjct: 479 -----DNIDLSVAQQGITQ-ILTRQHGNKDF--FVMNTDSIRQTIRQTTATMTLLVSAIA 530

Query: 292 GISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLV 351
            ISLIVG  G+ N M  +V E+TREIG+  A+GA+  DIM  F+  + ++ L GG LG++
Sbjct: 531 LISLIVGGIGVMNIMLVSVTERTREIGVRMAVGARTGDIMQQFLIEAVLVCLCGGILGVI 590

Query: 352 LGTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEA 411
           L  +   I       S  S   FV S   + +A  CS   G+I G  PA  A++L+P+ A
Sbjct: 591 LSLLAGAI------ASRISGVTFVYSAPVMALAFFCSSLIGVIFGFFPARRAARLQPIHA 644

Query: 412 LRSE 415
           L  E
Sbjct: 645 LERE 648