Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 648 a.a., MacB family efflux pump subunit from Dickeya dadantii 3937

 Score =  139 bits (351), Expect = 2e-37
 Identities = 117/424 (27%), Positives = 207/424 (48%), Gaps = 49/424 (11%)

Query: 7   FNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTAS 66
           F MA + + + ++R+++T+LGI+IGIASV+++++ G      V + +N M +  + +   
Sbjct: 259 FRMALRAMNAQRMRTFLTMLGIIIGIASVVSVVALGKGSQQQVLEHINAMGTSTLEIFPG 318

Query: 67  AAQGSDDDEDPELTDMDVLILNGISDIEY------VDVRVSTRNEVRFAGGRETATITGV 120
              G     D     +  L +N +  +E       V   VST   +R+A    + +++GV
Sbjct: 319 KDFG-----DMRSAAIQTLRVNDLRPLEQQPYIHSVTPTVSTSVTLRYASKAVSVSVSGV 373

Query: 121 DPA-------VWSQMTD-EELSAGRLLQASDSNAVIISYYTATEAFDR-EIGINQMITIG 171
                     V SQ      LS  RL Q +     +I   T  + F   E  + Q+I +G
Sbjct: 374 GEQFFTVRGYVLSQGNGFSPLSVERLTQEA-----VIDQNTRNKLFPNGENPLGQVIFLG 428

Query: 172 NKQFKVVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEI 231
               +++G+    ++ GFG    ++   +++PY  V    +      SI+ + +      
Sbjct: 429 TLPCRIIGVTTRKQS-GFGSDENLN---IWVPYTTVMRRMVGQSYLRSITVRVK------ 478

Query: 232 IFTLYEDVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIA 291
                ++++ + A + I + ++  +H N+D   F + + ++ +   Q  + +T  +S IA
Sbjct: 479 -----DNIDLSVAQQGITQ-ILTRQHGNKDF--FVMNTDSIRQTIRQTTATMTLLVSAIA 530

Query: 292 GISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLV 351
            ISLIVG  G+ N M  +V E+TREIG+  A+GA+  DIM  F+  + ++ L GG LG++
Sbjct: 531 LISLIVGGIGVMNIMLVSVTERTREIGVRMAVGARTGDIMQQFLIEAVLVCLCGGVLGVM 590

Query: 352 LGTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEA 411
           L  +   I       S  SS  F+ S  S+V A  CS   G+I G  PA  A++L+P+ A
Sbjct: 591 LSLLAGAI------ASRVSSVAFLYSPTSMVAAFLCSSLIGVIFGFFPARRAAQLQPIHA 644

Query: 412 LRSE 415
           L  E
Sbjct: 645 LERE 648