Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 453 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  144 bits (364), Expect = 4e-39
 Identities = 118/455 (25%), Positives = 217/455 (47%), Gaps = 51/455 (11%)

Query: 4   LKLFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITL 63
           L  F  A + V +++LRS +T LGI+ G+A+VIA+++ G+     + +Q+  +  + I +
Sbjct: 7   LSNFYSALEAVMANRLRSLLTALGIIFGVAAVIAMMAIGNGAQQEILEQIKLVGVNNIII 66

Query: 64  TASAAQGSDDDED--------------PELTDMDV-LILNGISDIEYVDVRVSTRNEVRF 108
                Q  ++ +D              P L  +DV  I   I  I+ +   V     +  
Sbjct: 67  EPVVEQVEEEVQDGPGGGPGAEKNKFSPGLRMLDVEAIQEVIPGIQRISPEVIMDTHIVK 126

Query: 109 AGGRETATITGVDPAVWSQMTDEELSAGRLLQASD----SNAVIISYYTATEAFDREIGI 164
           +G R +A + GV P  + ++T+ +L  G +   ++        II     T+ F +E  I
Sbjct: 127 SGVRRSAKLVGVTPEYF-KVTNFKLREGGMFTENNLLNGDPVCIIGRGVQTKFFSKENAI 185

Query: 165 NQMITIGNKQFKVVGILEED--ETQGFGQMGGMSSNT-VYMPYEAVYTLELDDD--ASYS 219
            + I  GN+  +V+GILEE     +   ++G    N  VY+P + +     + D   S S
Sbjct: 186 GKRIKCGNQWMRVIGILEERIVSDKSLAKLGIRDFNMDVYIPMQTMLVRYKNRDMVTSGS 245

Query: 220 ISEKEEGV-----------------YDEI--IFTLYEDVNQTTALENIQKKLMMSRHVNE 260
           +    +GV                 Y +I  +    E+ +       +  +L+  +H N 
Sbjct: 246 LVSGRQGVVIINGEVQQNTSNKQTNYHQIDKLVVQVEESSMLNPTAEVLSRLLERKHYNV 305

Query: 261 DNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIM 320
            + + TI    + +  ++  ++    L  IAGISL+VG  GI N M  +V+E+ +EIG+ 
Sbjct: 306 IDFEITIPE-LLLKQQQRTQNIFNIVLGAIAGISLLVGGIGIMNIMLASVMERIKEIGLR 364

Query: 321 KAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQIIVWFIAQSMDSSYQFVLSIKS 380
            A+GA+  DI+  F+F + +I + GG +G++LG IL+ ++  F        +  +++I S
Sbjct: 365 LALGAQKTDIVHQFLFEAMMISVTGGIIGVILGIILASLVSQF------GDFPTIITIPS 418

Query: 381 VVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
           ++++   +   G+I GI PA  A+   P+ +LR E
Sbjct: 419 ILVSFSVAATVGLIFGIAPAKRAASQDPITSLRHE 453