Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  105 bits (263), Expect = 2e-27
 Identities = 107/433 (24%), Positives = 194/433 (44%), Gaps = 37/433 (8%)

Query: 1   MKPLKLFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDE 60
           M+ L+    A + +KS++LR+ +T L I IGI +++ +++A D +   + +  + + ++ 
Sbjct: 1   MELLENIKEALRSIKSNRLRTILTGLIIAIGITALVGMLTAIDGMKAQIEESFSGLGANN 60

Query: 61  ITLTASAAQGS-------DDDEDPELTDMDVL-ILNGISD--IEYVDVRVSTRNEVRFAG 110
             + +    G         + +   ++  D L    G S   +  V  RVS   EV+   
Sbjct: 61  FDVRSKNTSGQRVTRSGVTEKQFKPVSYKDALDFRKGYSSRGMATVSTRVSGSTEVKRGS 120

Query: 111 G--RETATITGVDP---AVWSQMTDEELSAGRLLQASDSNAVIISYYTATEAF-DREIGI 164
                   I GVD     +  Q  +E  +   +     +N  +I        F   E  +
Sbjct: 121 EITNPNVRIIGVDENYVLIKGQNIEEGRNFSNVEIEYGNNVCLIGSEIVELLFKSHENPV 180

Query: 165 NQMITIGNKQFKVVGILEEDETQGFGQMGGMSS--NTVYMPYEAVYTLELDDDASYSISE 222
              ++    ++ +VG+LEE      G +G  S    T+ +P E    L+      Y+I+ 
Sbjct: 181 GAYVSFFGNRYSIVGVLEEQ-----GSVGNDSGVDRTILIPVENASRLDQTGGFWYTIT- 234

Query: 223 KEEGVYDEIIFTLYEDVNQTTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQIISM 282
               V       +  ++ Q T L    +K+   R    D+ +  ++S  V E  E++   
Sbjct: 235 ----VSTSDPTKMEYEMGQATGL---MRKVREDRVGELDSFE-VVKSNNVGESLEEVAGY 286

Query: 283 LTTFLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIG 342
           L      I  I+L+    G+ N M  +V E+TREIGI KA+GA  K I   F+  + +I 
Sbjct: 287 LRIGGFGIGFITLLGASVGLMNIMLVSVTERTREIGIRKALGATPKRIRQQFLIEAIVIC 346

Query: 343 LVGGFLGLVLGTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYN 402
           ++GG  G+++G  +  I+  F+         F++    +++A    +  G+++G+IPA  
Sbjct: 347 IMGGVFGVLVGMGIGNIVASFVGPG-----GFLVPWLWMLLAFMICVLVGLVSGVIPAIK 401

Query: 403 ASKLKPVEALRSE 415
           ASKL P+EALR E
Sbjct: 402 ASKLDPIEALRYE 414