Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 415 a.a., ABC-type antimicrobial peptide transport system, permease component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  108 bits (271), Expect = 2e-28
 Identities = 109/440 (24%), Positives = 193/440 (43%), Gaps = 68/440 (15%)

Query: 7   FNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTAS 66
           F  A + ++S+  R+ +++LG+ IGI ++IA+ +  D L  ++    + + ++ + +   
Sbjct: 11  FRFALQALRSNLTRTVLSLLGVTIGIFAIIAVFTLVDSLEKNIKSSFSFLGTNVLRVDRF 70

Query: 67  AAQGSDDD--------EDPELTDMDVLILNGISDIEYVDVRVSTRNEV-RFAGGRETATI 117
                  +          P      V +   + + E + +  S    + R +   E A +
Sbjct: 71  PFSSGPGEYPWWRYFRRPPANYSEFVFLKERLKNAEAITISASASATLKRGSSSFEGANL 130

Query: 118 TGVD---------PAVWSQM-TDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQM 167
            GV          P V  +  T+ E++A R       N  ++    A   F     I + 
Sbjct: 131 EGVVFDHKEVYDVPVVDGRFFTELEITAAR-------NVTVLGAKIANALFPEGDAIGKE 183

Query: 168 ITIGNKQFKVVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASY----SISEK 223
           + I  ++F V+G+LEE+                    E ++ L   DDA      S  + 
Sbjct: 184 MKIKGQKFMVIGLLEEEG-------------------EGLFDLPSKDDACLIPFGSFGKM 224

Query: 224 ----EEGVYDEIIFTLYEDVNQTTALENIQKKLMMSRH----VNEDNMDFTI-RSPTVFE 274
                 G+   I     +      ALEN    L+  +       ED  DF + +S  +  
Sbjct: 225 YYLGRWGIEPTIAAKGMDSDRGLIALENEMTGLLRGKRGLKPTEED--DFALNKSEFIQN 282

Query: 275 GPEQIISMLTTFLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLF 334
               I  +++   + I G S++VG  GI+N MF +V E+T  IGI K++GAKN  I+L F
Sbjct: 283 AIGAIFDVISIAGAVIGGFSILVGGFGIANIMFVSVRERTNIIGIQKSLGAKNYFILLQF 342

Query: 335 VFNSAIIGLVGGFLGLVLGTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGII 394
           +F S  + L GG  GLVL        V+ I      S +  +S K++ + IG S+  G++
Sbjct: 343 LFESTFLSLFGGLTGLVL--------VFAITFIPLGSLEIFMSAKNMALGIGLSMVIGML 394

Query: 395 AGIIPAYNASKLKPVEALRS 414
           +G++PA  A+++ PVEA+R+
Sbjct: 395 SGVVPAGIAARMDPVEAIRT 414