Pairwise Alignments

Query, 415 a.a., formylmethanofuran dehydrogenase subunit C from Methanococcus maripaludis S2

Subject, 224 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 7/130 (5%)

Query: 88  IIVEGDAGFHVGCEMKGGEILVKGDVKPWAGREMEGGTLHIFGNAGDHLGGCYRGRWEGM 147
           I +EG AG++     +   I V G+V       M  G++ + G+A    G    G     
Sbjct: 48  IDIEGHAGYYCAGMNQQASITVHGNVGVGCAENMMSGSVRVKGSASQAAGATAHG----- 102

Query: 148 LGGTIIVEGDAGNNVGDGMVDGKIVVNGNVRAFCGIRLNGGVLYVGGNAIRAVGVEMKKG 207
             G +++EGDAG   G  M    IVV G++          G L V G+A  A+G  + + 
Sbjct: 103 --GLLVIEGDAGARCGISMKGIDIVVGGSIGHMSCFMGQAGRLVVCGDAGDALGDSLYET 160

Query: 208 TIIVAGKIKN 217
            I V G +++
Sbjct: 161 HIYVKGTVES 170



 Score = 49.7 bits (117), Expect = 8e-11
 Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 7/97 (7%)

Query: 83  MTAGKIIVEGDAGFHVGCEMKGGEILVKGDVKPWAGREMEGGTLHIFGNAGDHLGGCYRG 142
           M +G + V+G A    G    GG ++++GD     G  M+G  + + G+ G H+  C+ G
Sbjct: 81  MMSGSVRVKGSASQAAGATAHGGLLVIEGDAGARCGISMKGIDIVVGGSIG-HM-SCFMG 138

Query: 143 RWEGMLGGTIIVEGDAGNNVGDGMVDGKIVVNGNVRA 179
           +      G ++V GDAG+ +GD + +  I V G V +
Sbjct: 139 Q-----AGRLVVCGDAGDALGDSLYETHIYVKGTVES 170



 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 125 TLHIFGNAGDHLGGCYRGRWEGMLGGTIIVEGDAGNNVGDGMVDGKIVVNGNVRAFCGIR 184
           ++ I G+AG +  G  +         +I V G+ G    + M+ G + V G+     G  
Sbjct: 47  SIDIEGHAGYYCAGMNQQ-------ASITVHGNVGVGCAENMMSGSVRVKGSASQAAGAT 99

Query: 185 LNGGVLYVGGNAIRAVGVEMKKGTIIVAGKI 215
            +GG+L + G+A    G+ MK   I+V G I
Sbjct: 100 AHGGLLVIEGDAGARCGISMKGIDIVVGGSI 130



 Score = 28.5 bits (62), Expect = 2e-04
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)

Query: 67  IKIAGDAGNVKLIGFQMTAGKIIVEGDAGFHVGCEMKGGEILVKGDVK 114
           I + G  G++    F   AG+++V GDAG  +G  +    I VKG V+
Sbjct: 124 IVVGGSIGHMSC--FMGQAGRLVVCGDAGDALGDSLYETHIYVKGTVE 169