Pairwise Alignments

Query, 415 a.a., formylmethanofuran dehydrogenase subunit C from Methanococcus maripaludis S2

Subject, 228 a.a., formyl-methanofuran dehydrogenase from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 34/113 (30%), Positives = 63/113 (55%), Gaps = 9/113 (7%)

Query: 67  IKIAGDAGNVKLIGFQMTAGKIIVEGDAGFHVGCEMKGGEILVKGDVKPWAGREMEGGTL 126
           + + G AG    +   M +G +++EGDA  + G   +GG +++KG+     G  M+G  +
Sbjct: 70  VTVHGSAGPG--VAENMMSGTVVIEGDASQYAGATGRGGLLVIKGNAASRCGISMKGIDI 127

Query: 127 HIFGNAGDHLGGCYRGRWEGMLGGTIIVEGDAGNNVGDGMVDGKIVVNGNVRA 179
            + GN G H+   + G+      G ++V GDAG+ +GD + + K+ V G+V++
Sbjct: 128 VVKGNIG-HM-SAFMGQ-----SGHLVVCGDAGDALGDSLYEAKLFVRGSVKS 173



 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 7/128 (5%)

Query: 90  VEGDAGFHVGCEMKGGEILVKGDVKPWAGREMEGGTLHIFGNAGDHLGGCYRGRWEGMLG 149
           V G  G++      GG + V G   P     M  GT+ I G+A  + G   RG       
Sbjct: 53  VHGSVGYYCAGMNDGGTVTVHGSAGPGVAENMMSGTVVIEGDASQYAGATGRG------- 105

Query: 150 GTIIVEGDAGNNVGDGMVDGKIVVNGNVRAFCGIRLNGGVLYVGGNAIRAVGVEMKKGTI 209
           G ++++G+A +  G  M    IVV GN+          G L V G+A  A+G  + +  +
Sbjct: 106 GLLVIKGNAASRCGISMKGIDIVVKGNIGHMSAFMGQSGHLVVCGDAGDALGDSLYEAKL 165

Query: 210 IVAGKIKN 217
            V G +K+
Sbjct: 166 FVRGSVKS 173



 Score = 56.2 bits (134), Expect = 9e-13
 Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 125 TLHIFGNAGDHLGGCYRGRWEGMLGGTIIVEGDAGNNVGDGMVDGKIVVNGNVRAFCGIR 184
           T+ + G+ G +  G   G       GT+ V G AG  V + M+ G +V+ G+   + G  
Sbjct: 50  TVDVHGSVGYYCAGMNDG-------GTVTVHGSAGPGVAENMMSGTVVIEGDASQYAGAT 102

Query: 185 LNGGVLYVGGNAIRAVGVEMKKGTIIVAGKI 215
             GG+L + GNA    G+ MK   I+V G I
Sbjct: 103 GRGGLLVIKGNAASRCGISMKGIDIVVKGNI 133



 Score = 32.3 bits (72), Expect = 1e-05
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 173 VNGNVRAFCGIRLNGGVLYVGGNAIRAVGVEMKKGTIIVAGKIKNFAPGFISTG---VVS 229
           V+G+V  +C    +GG + V G+A   V   M  GT+++ G    +A G    G   V+ 
Sbjct: 53  VHGSVGYYCAGMNDGGTVTVHGSAGPGVAENMMSGTVVIEGDASQYA-GATGRGGLLVIK 111

Query: 230 DYETGLSGLALPGKLI---GFNGDQAFFNKPKGKLYVSLSENYDLLNDEL 276
                  G+++ G  I   G  G  + F    G L V   +  D L D L
Sbjct: 112 GNAASRCGISMKGIDIVVKGNIGHMSAFMGQSGHLVV-CGDAGDALGDSL 160