Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 285 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score =  130 bits (328), Expect = 2e-35
 Identities = 72/250 (28%), Positives = 131/250 (52%), Gaps = 6/250 (2%)

Query: 13  FALSVFILFILMIV-----MSIVTNISFETFYDSLFSKEIQFAIKLSLETASIATILGTL 67
           F  +V  LF+++++     +     + F  F           A+++S  TA IA ++  +
Sbjct: 25  FGYTVTYLFLIILIPLGGLVWSTAKLGFADFIAIATDSRTLNALRVSFGTAFIAALVNAV 84

Query: 68  LGVPAAYALARYNFKGKDIVDSIVELPVILPPLITGFALLVFFGNTVF-GKFITENIIEI 126
            GV  A+ L RY F G+  VD+IV+LP  LP  + G AL   + N  + G       I+I
Sbjct: 85  FGVIVAWVLTRYRFPGRRFVDAIVDLPFALPTAVAGIALTTLYANRGWVGSLFEPFGIKI 144

Query: 127 LFTYKGTIVAQFFVATPFIIRTSKSVFECIDEKYELIAQSLGSKKYESFLDVVIPMAKNG 186
            FT  G ++A  F+  PF++RT + V E ID + E +A +LG+ ++++   V++P     
Sbjct: 145 AFTPTGIVIALIFIGLPFVVRTVQPVMEEIDRQVEEVAATLGANRFQTITRVLLPSLTPA 204

Query: 187 IIAGAILAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISLGDLEKALAVSLIFLLVA 246
           I+ G  LA+AR +GE+G+ + +AG     +E  P+ + + +   +   A  ++ I L+++
Sbjct: 205 ILTGFALAFARGVGEYGSVIFIAGNIPYVSEIAPLLIVIRLEEFNYAAATGIATIMLIIS 264

Query: 247 TLVLVIIRSV 256
             +L +I  +
Sbjct: 265 FAMLFLINLI 274