Pairwise Alignments

Query, 343 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 348 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

 Score =  171 bits (432), Expect = 3e-47
 Identities = 98/306 (32%), Positives = 177/306 (57%), Gaps = 13/306 (4%)

Query: 21  LEVKNSDYFVFLGLSGSGKTTILEMIAGFIKPDSGKIMLNGVDITNKPINERKIVLCNGK 80
           L +        LG SG GKTTIL ++AG  KP  G+I ++G D+T++ I +R I +    
Sbjct: 27  LTIPQGQMVTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGEDVTHRSIQQRDICMVFQS 86

Query: 81  Y-LFPHLTIQKNIEYGIKHLKKP--EKKEKVDNISKLLNITHLLNRKPERLSSGEQQRVA 137
           Y LFPH+++ +N+ YG+K L  P  E K +V     ++++    +R  +++S G+QQRVA
Sbjct: 87  YALFPHMSLGENVGYGLKMLGVPRAELKARVKEALAMVDLEGFEDRFVDQISGGQQQRVA 146

Query: 138 LAMALVMEPEIILLDEPLSSLDRLLHEKLMYDLKEVHKSSNVTFIHVTHDFSEAAVLSNK 197
           LA AL+++P+++L DEPLS+LD  L   +   ++E+ K  ++T ++VTHD SEA  +S+ 
Sbjct: 147 LARALILKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQFDITSLYVTHDQSEAFAVSDT 206

Query: 198 MAILRNGKIEHIGTLQNVLKHPQNEFVAKFVGIKNILYGNCIEKDGNYIIQLLGFEI--P 255
           + ++  G I  IG+ Q++ + P + F+A F+G  N+        DG   + + G+ +  P
Sbjct: 207 VLVMNKGHIMQIGSPQDLYRQPASRFMASFMGDANLFPATF--SDG--YVDIYGYHLPRP 262

Query: 256 VKEANYGEITLGIFPKDIIVSKKSEKDSKIYAGKIKSIVPSGPFDSKAVIEFNNIELISE 315
           +     GE  +G+ P+ I +S + E+  +     I+ +   GP   +  +E++  E++ +
Sbjct: 263 LHFGTQGEGMVGVRPEAITLSDRGEESQRCV---IRHVAYMGP-QYEVTVEWHGQEILLQ 318

Query: 316 ISNSDL 321
           ++ + L
Sbjct: 319 VNATRL 324