Pairwise Alignments

Query, 362 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 352 a.a., hypothetical protein from Methanococcus maripaludis S2

 Score =  404 bits (1037), Expect = e-117
 Identities = 218/368 (59%), Positives = 253/368 (68%), Gaps = 26/368 (7%)

Query: 1   MKKFLVGFILFSMVVSVIPGAVVDDDTKCIWCTEWEPYGLYAGQNELVGNVSVRVCGDNL 60
           MKKFLVGFILFSMV SVIPGAV             E YGLYAGQ+E VG V++ V GD L
Sbjct: 1   MKKFLVGFILFSMVFSVIPGAVAI-----------ECYGLYAGQDEYVGTVTIDVVGDIL 49

Query: 61  EYKYEITEPGWCISEIHLMALNESPNDTSSSWYTK-YVTKKGNPKVGQFEINEE-GLCVK 118
            + YE T PGW ISEIHLMALNESPND SSSWYTK Y+TK GNPKVGQFEI E    CV 
Sbjct: 50  NFNYE-TIPGWRISEIHLMALNESPNDNSSSWYTKGYITKTGNPKVGQFEIKEYFEPCVN 108

Query: 119 EYSGTLNLGEFNPCT-DKLYIAAHAVVCECECECIFTGCGYKAIDEAEGWVIDTSNYIEG 177
           EY GTLNL E      DKLY+AAHAVVCEC  E IF G GY+A+++   W ++ SNY EG
Sbjct: 109 EYCGTLNLTEIGVDPYDKLYVAAHAVVCECNRERIFAGFGYEAVNDF--WAVNYSNYTEG 166

Query: 178 SKGDNDPKRYNESHCLGPYDSQDKDYYTFTSLGQGGSIELYFENNICGDGDPCTPDLEIY 237
            +   D +RYN S CLG  D+  K   TFT +GQGGS+ +YF   ICGDG+  TPDLEIY
Sbjct: 167 IRKGGD-ERYNASLCLGKADTVSKTTNTFTCMGQGGSMVVYFNGGICGDGNNSTPDLEIY 225

Query: 238 ETTWGHTSTWTESICVEAYYNGSYNELGCVTNTAGSKDIR-NIFVNYIYNLPDCVCIEKI 296
           E T+ HT+ + E+I +E +YNGSY  +G VTN  G      +IF+N IY+LP  VCIEKI
Sbjct: 226 EVTYDHTANYYETISIEVFYNGSYYPVGNVTNHDGDGTFNDHIFINCIYDLPSGVCIEKI 285

Query: 297 RINDTSYVNANYDYDIDAVKANYWCVPEYEYICNCTGECETAWGN-----GTSFPGNNWA 351
           RIN+ S    N DYD+DA+KANY CVPEYEY+CN TG CE+AW N     G +FPGNNWA
Sbjct: 286 RINEIS--TNNGDYDLDAIKANYKCVPEYEYVCNYTGNCESAWANDTCFGGETFPGNNWA 343

Query: 352 MYFEYSNC 359
            Y  Y  C
Sbjct: 344 TYVIYPEC 351