Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 569 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  152 bits (385), Expect = 2e-41
 Identities = 107/326 (32%), Positives = 159/326 (48%), Gaps = 31/326 (9%)

Query: 173 ITHMSYGALSKNVKIALSKGSAAVKTAMC---SGEGGM--------------LEESFENA 215
           ++ MS+G+L +N   AL+ G+   KTA C   +GEGG+              L   +  A
Sbjct: 188 VSAMSFGSLGRNAIEALNLGA---KTAGCYHDTGEGGLSPYHRMHGGDIVWELGSGYFGA 244

Query: 216 YKYILEYVPNQYS--ITDENLKKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKV 273
                 + P +++   TD  +K V   EIK+ Q +KPG GG LPA KV+ EIA++RG   
Sbjct: 245 RNRDGTFSPERFAERATDPQVKMV---EIKLSQGAKPGHGGVLPAAKVTPEIAEIRGIPH 301

Query: 274 GQDIVSPSKFHDINNKDDLKNKVSNLREKSGGKPIGIKIAAGDIE-----ADLEVATYAK 328
           G+D +SPS+    +    +   V+ LRE SGGKP+GIK+  G        A   V T  +
Sbjct: 302 GEDCISPSRHSAFSTPAQMMEFVAQLRELSGGKPVGIKLCVGHPSEVFALAKAMVKTGIQ 361

Query: 329 PDFITIDGRPGATAASPKFIKDSTSVPTIFALYRAREFFNKNGIT-DISLVITGGLRISS 387
           PDF+ +DG  G T A+P  + D   +P    L   R      G+  ++ L  +G +    
Sbjct: 362 PDFVVVDGAEGGTGAAPHELADHLGMPLREGLILMRNALVGTGLRHEVRLAASGKVTSGF 421

Query: 388 DFAKAIAIGADAIAIGTAALMATACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKL 447
             A  +AIGAD      A + +  C     C TG CP GVTT  P L+  L ++  A+++
Sbjct: 422 SMAANMAIGADWCNAARAFMFSLGCVMSMRCHTGTCPTGVTTNDPHLQRGLVVDEKAERV 481

Query: 448 SNYLRVSTEELKTFARLTGNKNIHDL 473
           +N+ R S   L       G ++  DL
Sbjct: 482 ANFHRHSVHALAELVAAAGLEHPGDL 507