Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 1481 a.a., glutamate synthase from Pseudomonas simiae WCS417

 Score =  125 bits (313), Expect = 1e-32
 Identities = 93/310 (30%), Positives = 144/310 (46%), Gaps = 22/310 (7%)

Query: 176  MSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKY-------ILEYVPNQYS 228
            +S GALS     AL++    +     SGEGG      E+  +Y       I +    ++ 
Sbjct: 862  ISLGALSPEAHEALAEAMNRLGARSNSGEGG------EDPARYGTIKSSKIKQVATGRFG 915

Query: 229  ITDENLKKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINN 288
            +T E L   + ++IK+ Q +KPG GG LP  KV+  IAKLR    G  ++SP   HDI +
Sbjct: 916  VTPEYLVNAEVLQIKVAQGAKPGEGGQLPGGKVNGLIAKLRYAVPGVTLISPPPHHDIYS 975

Query: 289  KDDLKNKVSNLREKSGGKPIGIKIAA----GDIEADLEVATYAKPDFITIDGRPGATAAS 344
             +DL   + +L++ +    + +K+ A    G I A +  A YA  D ITI G  G T AS
Sbjct: 976  IEDLSQLIFDLKQVNPQALVSVKLVAEAGVGTIAAGVAKA-YA--DLITISGYDGGTGAS 1032

Query: 345  PKFIKDSTSVPTIFALYRAREFFNKNGIT-DISLVITGGLRISSDFAKAIAIGADAIAIG 403
            P         P    L    +    N +   + +   GGL+   D  KA  +GA++   G
Sbjct: 1033 PLTSIKYAGAPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFG 1092

Query: 404  TAALMATACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFAR 463
            TA ++A  C+  RIC    C  GV TQ  +L+    I  +   + N+     EE + +  
Sbjct: 1093 TAPMIALGCKYLRICHLNNCATGVATQNEKLRKDHYIG-TVDMVVNFFTYVAEETREWLA 1151

Query: 464  LTGNKNIHDL 473
              G +++ +L
Sbjct: 1152 KLGVRSLEEL 1161