Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 539 a.a., glutamate synthase from Pseudomonas simiae WCS417

 Score =  148 bits (373), Expect = 5e-40
 Identities = 115/378 (30%), Positives = 175/378 (46%), Gaps = 27/378 (7%)

Query: 137 GAQLAKFPLNNDEEVITKTIIGPKAKHPLIIETPIF-ITHMSYGALSKNVKIALSKGSAA 195
           G  +   PL+ D       + GP+   P      +F I+ MS+G+LS N   AL++G+  
Sbjct: 127 GHSMRPAPLS-DPSAFRVMVGGPQCTQPY--SASVFNISAMSFGSLSANAIRALNQGAKL 183

Query: 196 VKTAMCSGEGGMLEESFENAYKYILE--------------YVPNQYSITDENLKKVDAVE 241
              A  +GEG +     EN      E              + P ++++  +N  +V  +E
Sbjct: 184 GNFAHDTGEGSISPYHRENGGDLTWELGSGYFGCRTSDGRFDPERFAVQAQN-PQVRMIE 242

Query: 242 IKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNKDDLKNKVSNLRE 301
           IK+ Q +KPG GG LP  KV++EIA  RG  +G+D +SPS+    +   +L + ++ LRE
Sbjct: 243 IKMSQGAKPGHGGILPKHKVTQEIADTRGILMGEDCISPSRHSAFSTPIELMHFIAQLRE 302

Query: 302 KSGGKPIGIKIAAGDIEADLEVA-----TYAKPDFITIDGRPGATAASPKFIKDSTSVPT 356
            SGGKP+G K   G     + +A     T   PDFI +DG+ G T A+P    D   VP 
Sbjct: 303 LSGGKPVGFKFCLGHPWEFMGIAKAMLETGILPDFIVVDGKEGGTGAAPVEFTDHIGVPL 362

Query: 357 IFALYRAREFFNKNGITD-ISLVITGGLRISSDFAKAIAIGADAIAIGTAALMATACQQY 415
              L           + D I L  +G +  + D A  +AIGAD        + A  C Q 
Sbjct: 363 REGLLFVHNTLVGLNLRDKIKLGASGKIVSAFDIASVLAIGADWANSARGFMFAIGCIQS 422

Query: 416 RICDTGECPVGVTTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFARLTGNKNIHDLSV 475
           + C T +CP GV TQ P  +  L +   A+++ N+ R + + L       G  +   LS 
Sbjct: 423 QSCHTNKCPTGVATQDPLRQRALVVPDKAQRVFNFHRNTLKALAEMLAAAGLDHPSQLSA 482

Query: 476 DDLC--TSDSEISNFTSI 491
             L    S +EI  F+ +
Sbjct: 483 KHLVRRMSATEIKLFSQL 500