Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 576 a.a., Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) from Variovorax sp. SCN45

 Score =  141 bits (356), Expect = 5e-38
 Identities = 103/335 (30%), Positives = 154/335 (45%), Gaps = 23/335 (6%)

Query: 173 ITHMSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKYILEYVPNQYSITDE 232
           I+ MS+GALS N  +AL++G+     A  +GEG + +    +    I E     +   ++
Sbjct: 187 ISAMSFGALSANAILALNQGAKMGGFAHDTGEGSISQHHRVHGGDLIWEIGSGYFGCRND 246

Query: 233 NLK-------------KVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVS 279
           +               +V  +EIK+ Q +KPG GG LPA KV+ EIA  RG  VG D +S
Sbjct: 247 DGTFSEERFTANARDPQVKMIEIKLSQGAKPGHGGVLPAPKVTPEIAAARGVPVGVDCIS 306

Query: 280 PSKFHDINNKDDLKNKVSNLREKSGGKPIGIKIAAG------DIEADLEVATYAKPDFIT 333
           PS     +   ++ + V+ LRE SGGKP G K   G       I   ++ AT   PDFI 
Sbjct: 307 PSSHSAFSTPTEMMHFVARLRELSGGKPTGFKFCLGHPWEWFGIVKAMQ-ATGITPDFIV 365

Query: 334 IDGRPGATAASPKFIKDSTSVPTIFALYRARE-FFNKNGITDISLVITGGLRISSDFAKA 392
           +DG  G T A+P    D    P    L          N    I +     +  + D A+ 
Sbjct: 366 VDGAEGGTGAAPVEFSDHVGAPLQEGLLLVHNTLVGVNLRHRIKIGCAAKVITAFDVARM 425

Query: 393 IAIGADAIAIGTAALMATACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKLSNYLR 452
           +A+GAD        +MA  C Q + C TG CP GVTTQ P  +  L +   A ++ N+ R
Sbjct: 426 MALGADWCNAARGFMMALGCIQAQSCHTGHCPTGVTTQDPVRQQALVVPTKADRVRNFHR 485

Query: 453 VSTEELKTFARLTGNKNIHDLSVDDLC--TSDSEI 485
            +   L+   +  G  +   ++   +    SD+E+
Sbjct: 486 STLHALQELVQAAGLDHPQQITAHHIVRRISDTEV 520