Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 539 a.a., Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  140 bits (352), Expect = 1e-37
 Identities = 104/333 (31%), Positives = 152/333 (45%), Gaps = 23/333 (6%)

Query: 173 ITHMSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKYILEYVPNQYSITDE 232
           I+ MS+GALS N   AL+ G+     A  +GEG +      N    I E     +   DE
Sbjct: 165 ISAMSFGALSANAIQALNAGAKQGGFAHDTGEGSISAWHRLNGGDLIWEIGSGYFGCRDE 224

Query: 233 NLK-------------KVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVS 279
             +             +V  +EIK+ Q +KPG GG LP  KV+ EIA  RG  VG D VS
Sbjct: 225 TGRFSPERFQANAIDPQVKMIEIKLSQGAKPGHGGVLPGPKVTPEIAAARGVPVGIDCVS 284

Query: 280 PSKFHDINNKDDLKNKVSNLREKSGGKPIGIKIAAGD-------IEADLEVATYAKPDFI 332
           PS         ++ + ++ LRE SGGKP+G K+  G        ++A L+  T  +PDFI
Sbjct: 285 PSSHSAFTTPIEMMHFITRLRELSGGKPVGFKLCIGHPWEWFAIVKAMLQ--TGVRPDFI 342

Query: 333 TIDGRPGATAASPKFIKDSTSVPTIFALYRARE-FFNKNGITDISLVITGGLRISSDFAK 391
            +DG  G T A+P    D    P    L          N    I +   G +  + D  +
Sbjct: 343 VVDGAEGGTGAAPLEFTDHVGAPLQEGLRLVHNTLVGVNLREHIKIGCAGKVVSAFDIVR 402

Query: 392 AIAIGADAIAIGTAALMATACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKLSNYL 451
           A+AIGAD        + A  C Q + C TG CP GVTTQ P  +  L +   A+++ ++ 
Sbjct: 403 AMAIGADWCNSARGFMFALGCIQAQSCHTGHCPTGVTTQDPVRQQALVVPDKAQRVFHFH 462

Query: 452 RVSTEELKTFARLTGNKNIHDLSVDDLCTSDSE 484
           + +   L+   +  G ++   ++   L    SE
Sbjct: 463 QSTLMALQELVQAAGLQHPRQITSHHLVRRVSE 495