Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 1517 a.a., Glutamate synthase [NADPH] large chain from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  133 bits (334), Expect = 5e-35
 Identities = 96/304 (31%), Positives = 141/304 (46%), Gaps = 10/304 (3%)

Query: 176  MSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESF-ENAYKYILEYVPNQYSITDENL 234
            MS GALS     AL++   ++     SGEGG     +  N    I +    ++ +T   L
Sbjct: 894  MSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGRFGVTPAYL 953

Query: 235  KKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNKDDLKN 294
               D ++IK+ Q +KPG GG LP +KV+  IAKLR    G  ++SP   HDI + +DL  
Sbjct: 954  VNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQ 1013

Query: 295  KVSNLREKSGGKPIGIKIAA----GDIEADLEVATYAKPDFITIDGRPGATAASPKFIKD 350
             + +L++ +    I +K+ +    G I   +  A YA  D ITI G  G T ASP     
Sbjct: 1014 LIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKA-YA--DLITIAGYDGGTGASPLSSVK 1070

Query: 351  STSVPTIFALYRAREFFNKNGIT-DISLVITGGLRISSDFAKAIAIGADAIAIGTAALMA 409
                P    L   ++    NG+   I L + GGL+   D  KA  +GA++   GT  ++A
Sbjct: 1071 YAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAESFGFGTGPMVA 1130

Query: 410  TACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFARLTGNKN 469
              C+  RIC    C  GV TQ  +L+      L   K++NY      E +      G   
Sbjct: 1131 LGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPF-KVTNYFEFIARETRELMAQLGVTR 1189

Query: 470  IHDL 473
            + DL
Sbjct: 1190 LVDL 1193