Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 543 a.a., Glutamate synthase [NADPH] large chain from Alteromonas macleodii MIT1002

 Score =  152 bits (384), Expect = 3e-41
 Identities = 108/357 (30%), Positives = 170/357 (47%), Gaps = 20/357 (5%)

Query: 137 GAQLAKFPLNNDEEVITKTIIGPKAKHPLIIETPIFITHMSYGALSKNVKIALSKGSAAV 196
           G  L+   + + +E    T+ GP  K P      + I+ MS+G+LSKN  +AL+KG+A  
Sbjct: 122 GHSLSAREVEDMDEDPRVTVGGPHCKKPYRASI-LNISAMSFGSLSKNAILALNKGAAKG 180

Query: 197 KTAMCSGEGGMLEESFENAYKYILEYVPNQYSITDEN-------------LKKVDAVEIK 243
                +GEGG+     EN    + +     +    ++             L  V  +EIK
Sbjct: 181 GFYHNTGEGGLTPYHLENGGDIVWQIGTGYFGCRSKDGGFDPVLFEEKAKLDNVKMIEIK 240

Query: 244 IGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNKDDLKNKVSNLREKS 303
           + Q +KPG GG LPA K + EIAK+RG + G  + SP +        ++ + +S LR+ S
Sbjct: 241 LSQGAKPGHGGILPAYKNTPEIAKIRGVEPGTQVDSPPRHKAFATPLEMVDFISQLRKLS 300

Query: 304 GGKPIGIKIAAGDIEADLE-----VATYAKPDFITIDGRPGATAASPKFIKDSTSVPTIF 358
           G KP+GIK+A G     +      V     PDFIT+DG  G T A+P    +S   P   
Sbjct: 301 GYKPVGIKLALGRKSEFIAMCKAMVEKDVTPDFITVDGGEGGTGAAPLEYTNSIGFPLRE 360

Query: 359 ALYRAREFFNKNGITD-ISLVITGGLRISSDFAKAIAIGADAIAIGTAALMATACQQYRI 417
           AL    +     GI D I ++ +G +  +   AK +++GAD        ++A  C Q   
Sbjct: 361 ALAFVDDCLTGFGIRDKIKIIASGKIITAFQLAKNLSLGADLCNSARGMMLALGCVQSLS 420

Query: 418 CDTGECPVGVTTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFARLTGNKNIHDLS 474
           C+T +CP GV TQ P+L   L +E   +++  + + +   L      TG+    +L+
Sbjct: 421 CNTNKCPTGVATQDPKLAKGLNVEDKNERVYRFHKKTIHALMDILSSTGHVRTSELN 477