Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 442 a.a., glutamate synthase large subunit from Agrobacterium fabrum C58

 Score =  232 bits (592), Expect = 2e-65
 Identities = 139/418 (33%), Positives = 227/418 (54%), Gaps = 21/418 (5%)

Query: 95  REYDDMEEH-MFDIHKISVTGESIIEPMRTKKPVISWESIFIKGAQLAKFPLNNDEEVIT 153
           R+    ++H + +I + + TG   I    TK+ V  ++ +   GA ++++PL    E   
Sbjct: 11  RKSATFDDHTLAEIRRAAATGIYDIRGAGTKRKVPHFDDLLFLGASISRYPLEGYREKCD 70

Query: 154 KTI-IGPK-AKHPLIIETPIFITHMSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEES 211
            T+ +G + AK P+ ++TPI I  MS+GALS N K AL +G+    T+  +G+GGM +E 
Sbjct: 71  TTVTLGTRFAKKPITLKTPITIAGMSFGALSGNAKEALGRGATIAGTSTTTGDGGMTDEE 130

Query: 212 FENAYKYILEYVPNQYSITDENLKKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGF 271
             ++   + +Y+P++Y +  ++L++ DA+E+ +GQ +KPG GG L  +K+S+ +A +R  
Sbjct: 131 RGHSQTLVYQYLPSRYGMNPKDLRRADAIEVVVGQGAKPGGGGMLLGQKISDRVANMRNL 190

Query: 272 KVGQDIVSPSKFHDINNKDDLKNKVSNLRE-KSGGKPIGIKIAAGDIEADLEVATYAKPD 330
             G D  S  +  D    DDL+ K+  LRE     KPI IK+       D  +A  A  D
Sbjct: 191 PKGIDQRSACRHPDWTGPDDLEIKILELREITDWEKPIYIKVGGARPYYDTALAVKAGAD 250

Query: 331 FITIDGRPGATAASPKFIKDSTSVPTIFALYRAREFFNKNGI-TDISLVITGGLRISSDF 389
            + +DG  G TAA+     ++  +PT+  +  A +     G+   + L+++GG+R  +D 
Sbjct: 251 VVVLDGMQGGTAATQDVFIENVGMPTLACIRPAVQALQDLGMHRKVQLIVSGGIRSGADV 310

Query: 390 AKAIAIGADAIAIGTAALMA----------------TACQQYRICDTGECPVGVTTQKPE 433
           AKA+A+GADA+AIGTAAL+A                T    Y     G+ P G+TTQ PE
Sbjct: 311 AKALALGADAVAIGTAALVALGDNDPHWEEEYQKLGTTAGAYDDWHEGKDPAGITTQDPE 370

Query: 434 LKDRLKIELSAKKLSNYLRVSTEELKTFARLTGNKNIHDLSVDDLCTSDSEISNFTSI 491
           L  RL    + ++L+NYL+V T E +T AR  G  ++H+L  +DL     E +    +
Sbjct: 371 LAARLDPVAAGRRLANYLKVMTLEAQTIARACGKNHLHNLEPEDLVALTMEAAAMAQV 428