Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 1782 a.a., glutamate synthase large subunit from Agrobacterium fabrum C58

 Score = 95.9 bits (237), Expect = 1e-23
 Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 20/267 (7%)

Query: 176  MSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKY-------ILEYVPNQYS 228
            MS+GAL      A++ G+  V     SGEGG      E+  +Y       I ++   ++ 
Sbjct: 965  MSHGALVAAAHEAVAHGTNMVGGMSNSGEGG------EHISRYGTIRASRIKQFASGRFG 1018

Query: 229  ITDENLKK--VDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDI 286
            +    L    ++ +EIKIGQ +KPG GG LP+ KV+ EIA  RG   G ++VSP   HD 
Sbjct: 1019 VWAGYLADPMLEEIEIKIGQGAKPGEGGQLPSPKVTVEIAAARGGTPGVELVSPPPHHDT 1078

Query: 287  NNKDDLKNKVSNLREKSGGKPIGIKIAAGDIEADLEV-ATYAKPDFITIDGRPGATAASP 345
             + +DL   + +   K+    + +K+ + +    + V    A  D I + G  G T A+ 
Sbjct: 1079 YSIEDLAQLIHD--AKAARVRVIVKLVSSEGIGTIAVGVAKAGADVINVAGNTGGTGAAA 1136

Query: 346  KFIKDSTSVPTIFALYRAREFFNKNGI-TDISLVITGGLRISSDFAKAIAIGADAIAIGT 404
                  T       +    +     G+   + L  +G  + +SD  K+  +G D+   GT
Sbjct: 1137 VTSLKYTGRAAEIGIAEVHQALCATGLRAKVLLRCSGAHQTASDVVKSALLGGDSFEFGT 1196

Query: 405  AALMATACQQYRICDTGECPVGVTTQK 431
             ALM   C   + C+  +CP G+TT +
Sbjct: 1197 TALMMLKCVMAKNCNI-KCPAGLTTNQ 1222