Pairwise Alignments

Query, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 803 a.a., ATP-dependent helicase, DEAD/DEAH box family, associated with Flp pilus assembly from Sphingobium sp. HT1-2

 Score =  104 bits (260), Expect = 2e-26
 Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 24/353 (6%)

Query: 46  LPDNFEEYLLKKNKKLYTHQYSALENVRIGKNILLTTSTASGKTLSFNLPIL-ETLQNDK 104
           LP    ++   +  ++  HQ   L   + G++ LL   T +GKTL+  LP L + + N  
Sbjct: 5   LPSILTDWFASRGWRVRRHQSDMLLAAQRGEHALLVAPTGAGKTLAGFLPTLADLIGNPA 64

Query: 105 DAT-ALYIYPTKALTNDQLNNLKNLENELNITLKPEIYDGDTPNSKRKSIREKS-RIILT 162
           D    LY+ P KAL  D   NL     E+ + ++ E   GDTP+ ++   R +   I+LT
Sbjct: 65  DGLHTLYVSPLKALAVDVRRNLLTPIEEMGLPIRVETRTGDTPSDRKARQRVRPPHILLT 124

Query: 163 NPHELHQVLQYNPKWMSFFKNLKYIVIDEAHTY-RGIFGSNISFLIRRLRRICEDYGSYP 221
            P  L  +L Y P     F++L+ +++DE H +     G  ++  + RL+ I  D     
Sbjct: 125 TPESLSLLLSY-PDAALLFEHLRTVIVDEVHAFATQKRGDLLNLSMARLQAINPDL---- 179

Query: 222 QFILASATLANAKEFSEKL-----VGLDFRVIDKDGSPKNKKYFVFYNTLKNEISESSWY 276
           + +  SAT+A+   +   L     +     V+ + G+  +    +    +      S  Y
Sbjct: 180 RRVALSATVADVDAYRAWLAPDGDIDAVTPVLGEAGAEPDVTILIPEGRVPWS-GHSGKY 238

Query: 277 SSAINILELCMKYGLQTIGFTLSRKMAELI--TIWTKKSLGNNILSRKISSYRSGFTPEE 334
           +++  + E+  +    T+ F  +R +AELI   +W+      N  +  I+ +    + E 
Sbjct: 239 AASQVMAEIAARQ--TTLVFCNTRGLAELIFQELWSV-----NDANLPIAIHHGSLSIEA 291

Query: 335 RRDIESRLKNGDLRAVTSTNALEVGIDIGSLDSVIMYGYPGTLMSLWQQAGRA 387
           RR +E+ +  G LRA+ +T +L++G+D G++D VI  G P     L Q+ GRA
Sbjct: 292 RRKVETAMAAGKLRALVATASLDLGVDWGNVDCVIQMGAPKGSSRLLQRIGRA 344