Pairwise Alignments

Query, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 792 a.a., large atp-dependant helicase-related protein from Agrobacterium fabrum C58

 Score = 90.9 bits (224), Expect = 2e-22
 Identities = 92/327 (28%), Positives = 142/327 (43%), Gaps = 28/327 (8%)

Query: 78  ILLTTSTASGKTLS-FNLPILETLQNDK--------DATALYIYPTKALTNDQLNNLKNL 128
           +LL   T +GKTL  F   + +  +  K            LYI P KAL  D   NL   
Sbjct: 1   MLLIAPTGAGKTLGGFMASLTDLAERGKVPPGSGFVGVHTLYISPLKALAVDIERNLTRP 60

Query: 129 ENELNITLKPEIYDGDTPNSKRKSIREKSRIILTNPHELHQVLQYNPKWMSFFKNLKYIV 188
            +E+ + +  E   GDTP +KR+  + K   IL    E   +L  N +   FF++LKY+V
Sbjct: 61  VSEMGLPIVIETRTGDTPQAKRQRQKVKPPDILLTTPEQVSLLLANKEAERFFRDLKYVV 120

Query: 189 IDEAHT-YRGIFGSNISFLIRRLRRICEDYGSYPQFILASATLANAKEFSEKLVGL---- 243
           +DE H+      G  +S  + R+RR   D     +FI  SAT+A   +    L       
Sbjct: 121 LDELHSLVTSKRGHLLSLALARVRRHAPDV----RFIGLSATVAEPMDLRRYLAPQGQGE 176

Query: 244 -DFRVIDKDGSPKNKKYFVFYNTLKNEISESSWYSSAINILELCMKYGLQTIGFTLSRKM 302
               +I  +G  K     +           S+ Y+     L   +K    T+ F  +R  
Sbjct: 177 PPAGLITVEGGAKPDISILHTEERIPWSGHSARYAG--KDLYEALKQHQTTLVFVNTRSQ 234

Query: 303 AELI--TIWTKKSLGNNILSRKISSYRSGFTPEERRDIESRLKNGDLRAVTSTNALEVGI 360
           AE +   +WT      N  +  I+ +       +RR +E+ +    LRAV +T+ L++GI
Sbjct: 235 AERVFQELWTV-----NDDNLPIALHHGSLDAGQRRRVEAAMAENKLRAVVATSTLDLGI 289

Query: 361 DIGSLDSVIMYGYPGTLMSLWQQAGRA 387
           D G +D V+  G P     L Q+ GR+
Sbjct: 290 DWGDVDLVVHVGAPKGASRLAQRIGRS 316