Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  117 bits (292), Expect = 3e-30
 Identities = 95/368 (25%), Positives = 183/368 (49%), Gaps = 52/368 (14%)

Query: 376 LATLLTNVSDVMNRVAKG--DFTAR--ADESRENNNLEKAINTAVSNVADLIKELREEVE 431
           +A  L  +  ++N +A+G  D T R  +D + E   +    NT +  +  +I ++   V 
Sbjct: 383 IARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSV- 441

Query: 432 LLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYS 491
                 QKV D       ++   A+ A +  +    Q  ++ + +  +      A++V  
Sbjct: 442 ------QKVSD-------SSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVAR 488

Query: 492 AAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKM---LGEDGKKINEV 548
            A +  +++    + +  G+  V +  +   SI  + +E+GK++ +   L +D + IN +
Sbjct: 489 NATQAAQAASHADQAASQGMRIVRDTST---SIGALAEEIGKAVSVVQTLAKDSENINAI 545

Query: 549 TGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGV 608
              I+ IAEQT LLALNA+IEAARAG+ G+GFAVVA E+++LA++ +K+ E+I   I+ +
Sbjct: 546 LTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQL 605

Query: 609 NKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENT 668
            +   D + +    +   D+ V    +  +AL    E++ ++   IN +         NT
Sbjct: 606 QQGTRDVVRVMEDSQSRTDESVQHAAKAAEAL----ETITQAVSVINDM---------NT 652

Query: 669 EGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEE-------VTQVAERVT 721
                   +IA+ +EE +A AE++  +   +  +  E+ G A+E       +T++AE+  
Sbjct: 653 --------QIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQR 704

Query: 722 KKSSQFKI 729
           +  +QFK+
Sbjct: 705 RLINQFKV 712