Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 653 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  117 bits (292), Expect = 2e-30
 Identities = 86/316 (27%), Positives = 164/316 (51%), Gaps = 25/316 (7%)

Query: 376 LATLLTNVSDVMNRVAKGDFT---ARADESRENNNLEKAINTAVSNVADLIKELREEVEL 432
           LA +LTN++  ++  A+GDF+   A    +RE +++E ++N   + + DL+  +R   E 
Sbjct: 325 LARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIEASLNRLRAYLVDLVGTIRGNAE- 383

Query: 433 LNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSA 492
                     E+ G+     +++      AE  +  +A++++S  ELE T +   +V   
Sbjct: 384 ----------EVVGSSRALAELSSGLHDGAERQAGDTAQIRDSLGELEATIQ---QVAGD 430

Query: 493 AEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLI 552
           A +   +S    +  E G   +  +++ + ++   + +  + I+ L E+   I  V  +I
Sbjct: 431 ASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIGGVLTVI 490

Query: 553 KDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRI 612
           + IA+QT LLALNA+IEAARAG+AG+GFAVVA E++SLA+    +  +I   I G+    
Sbjct: 491 RSIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQSLIAGLQSAA 550

Query: 613 DDTIDLGLKGKDEVDKGVI----AIDEVNDALLKIKESVNESAVKINGIKHGAQNASENT 668
             ++  G++ + E  +       A D   D ++   ++++E+AV+I  +   AQ +   +
Sbjct: 551 HQSVQ-GMRAQVEHAEATAQQAQAADGALDEIVGAIQTISETAVRIADVT--AQQSGAVS 607

Query: 669 EGALKNAQEIAALSEE 684
           E    N++ I  + E+
Sbjct: 608 E-IRDNSERIHQMGED 622