Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 683 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  127 bits (319), Expect = 2e-33
 Identities = 88/318 (27%), Positives = 154/318 (48%), Gaps = 16/318 (5%)

Query: 385 DVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDEL 444
           D +  +A GD T  A  +      E    T   ++   + +LR+ V  +N+   +V   +
Sbjct: 358 DEIEDLADGDLTVTASVT------EDFTGTIADSINYSVDQLRDLVATINLTAGQVAGAV 411

Query: 445 KGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIK 504
           +  + TA  +A+A+   A+  ++ S  + + ++ ++     A E  + AE +V       
Sbjct: 412 QDTQATAMHLAQASEHQAQQIAEASTAINQMAQSIDQVSANAAESSAVAERSV------- 464

Query: 505 ENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLAL 564
           E +  G E V N I  M +I   I +  K IK LGE  ++I ++  LI DIA+QT +LAL
Sbjct: 465 EIANKGNEVVHNTIHGMDNIREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQTNILAL 524

Query: 565 NASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKD 624
           NA+I+A+ AGDAG+GFAVVA E++ LAE    +   I   +  +    ++ +    +   
Sbjct: 525 NAAIQASMAGDAGRGFAVVADEVQRLAERSSAATRQIETLVRAIQADTNEAVISMEQTTT 584

Query: 625 EVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEE 684
           EV +G     +   AL +I+      A  I  I + AQ   + T  A + +  +  + + 
Sbjct: 585 EVVRGARLAQDAGVALEEIEGVSKTLAALIQSISNAAQ---QQTSSAGQISLTMNVIQQI 641

Query: 685 FTATAEEVTASTEELNSI 702
            T T+   TA+ E + ++
Sbjct: 642 TTQTSSGSTATAESIGNL 659