Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  122 bits (307), Expect = 4e-32
 Identities = 83/281 (29%), Positives = 151/281 (53%), Gaps = 13/281 (4%)

Query: 439 KVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEE--- 495
           +++  L+G  E+A Q+  AA +++      +  LQ  ++E+E       E+ +A +E   
Sbjct: 258 QLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQAQNDEIEQAATAVTEMSAAVDEVAG 317

Query: 496 ----TVKSSEEIKENSETGVEKVENAISRMQSITNVIDE-LGKSIKM--LGEDGKKINEV 548
               + ++S+   E+S+ G  ++   IS   SI N++DE LG S K   L    + I++V
Sbjct: 318 NAVSSAEASQASDEDSKHGHYQISETIS---SIQNLVDEVLGASNKAEGLAVQAQDISKV 374

Query: 549 TGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGV 608
             +I+ IA QT LLALNA+IEAARAG+AG+GFAVVA E++SLA+  + S E+I   I G+
Sbjct: 375 LEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQDSTEEIEQMITGI 434

Query: 609 NKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENT 668
            +    T++      ++    +   +    AL KI  ++++ + +   I   A+  +   
Sbjct: 435 QQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAISQISQRNLVIASAAEQQALVA 494

Query: 669 EGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGI 709
               ++   I  LS +  A A + +A+++EL+ +  ++ G+
Sbjct: 495 RDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDLNGL 535