Pairwise Alignments
Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2
Subject, 768 a.a., twitching motility protein PilJ from Variovorax sp. SCN45
Score = 146 bits (368), Expect = 4e-39
Identities = 94/321 (29%), Positives = 158/321 (49%), Gaps = 13/321 (4%)
Query: 387 MNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKG 446
+ VA+GD T A + + +AD + EE+ LL + V++
Sbjct: 452 LQTVAEGDLTQEATVTED----------ITGAIADSVNYTVEELRLL---VGNVQNTATR 498
Query: 447 AEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKEN 506
+T +QV +T++ A+++Q +++E+ + + E V S A+E+ + + +
Sbjct: 499 VAQTTSQVESTSTELLAASTEQLREIRETGQSVLTMAERINGVSSQAQESATVARQSLQA 558
Query: 507 SETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNA 566
+ +G++ V+NAI M SI + I E K IK LGE ++I E+T LI DI EQT +LALNA
Sbjct: 559 ASSGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALNA 618
Query: 567 SIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEV 626
+I+AA AG+AG+GF+VVA E++ LAE + I+ ++ + D + + V
Sbjct: 619 AIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISALVKAIQTDTQDAVGAMERSTQGV 678
Query: 627 DKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFT 686
+G D AL +I A I I A +++ N Q I A++E+
Sbjct: 679 VEGAKLSDNAGTALSEIDRVSRRLADLIEQISQSASREADSANVVAANIQHIFAVTEQTG 738
Query: 687 ATAEEVTASTEELNSIIEEIR 707
EL+ + EE+R
Sbjct: 739 EGTRTTAQQVRELSQMAEELR 759
Score = 45.1 bits (105), Expect = 1e-08
Identities = 83/409 (20%), Positives = 168/409 (41%), Gaps = 55/409 (13%)
Query: 350 ELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLE 409
E+ DS + ++ V+ L T + + L + + MN++ RAD S + +
Sbjct: 159 EVKDSADDLSRRVQGL--TNGDESLRLERVGNQYDEEMNKI--NPLVTRADTSAKAVLAQ 214
Query: 410 KAINTAV-------SNVADLIKELREEVELLNIQIQKVEDELKGAEETA--TQVAEAATQ 460
+ I T V + + + E+ E V L +Q E+ A + TQ +T
Sbjct: 215 RQILTQVGAALRDINQQSSTLLEMTETVASLKMQQNATLPEISAAGQLVMLTQRIGKSTN 274
Query: 461 ---VAEAASDQSAKL--------QESSEEL-----ENTYEGAKEVYSAA--EETVKSSEE 502
E + + L QE++ L + + G+K+ + E +K+ E+
Sbjct: 275 EFFTVEGVNPDAVFLLGKDLNTFQETTRGLLDGNAQQRFPGSKDPQTRQQLEAILKTYEQ 334
Query: 503 IKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLL 562
++ + + ++ ++ ++ +++ + K LG+ K++ TGL +L
Sbjct: 335 MRTQASAILGNLQGLVAAREAQASILTDSEPLRKSLGDLQDKLSARTGLGAGTIVLLFVL 394
Query: 563 ALNASIEAARAG----DAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDL 618
+L A A G G+ A VA + AE+ + +N+ + R+ + +
Sbjct: 395 SLAALALAGAIGFVQVREGRERAAVAERERLAAEQASEEAGRVNNANQAAILRLMNELQT 454
Query: 619 GLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEI 678
+G ++ + +++ A I +SVN + ++ + QN A +
Sbjct: 455 VAEG--DLTQEATVTEDITGA---IADSVNYTVEELRLLVGNVQN----------TATRV 499
Query: 679 AALSEEFTATAEE-VTASTEELNSIIEEIRGIAEEVTQVAERVTKKSSQ 726
A + + +T+ E + ASTE+L EIR + V +AER+ SSQ
Sbjct: 500 AQTTSQVESTSTELLAASTEQL----REIRETGQSVLTMAERINGVSSQ 544
Score = 33.5 bits (75), Expect = 4e-05
Identities = 30/187 (16%), Positives = 75/187 (40%), Gaps = 1/187 (0%)
Query: 543 KKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDIN 602
++ +E G + + A Q +L L ++ GD + V ++A+ + +VE++
Sbjct: 428 EQASEEAGRVNN-ANQAAILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELR 486
Query: 603 HTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQ 662
+ V + + + + A E + + +SV A +ING+ AQ
Sbjct: 487 LLVGNVQNTATRVAQTTSQVESTSTELLAASTEQLREIRETGQSVLTMAERINGVSSQAQ 546
Query: 663 NASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERVTK 722
++ +L+ A + + +E + I+ + ++E+ ++ E ++
Sbjct: 547 ESATVARQSLQAASSGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISD 606
Query: 723 KSSQFKI 729
+ Q +
Sbjct: 607 ITEQTNV 613
Score = 32.0 bits (71), Expect = 1e-04
Identities = 22/115 (19%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 399 ADESRENNNLEKAINTAVSNVADLIKELREEV-------ELLNIQIQKVEDELKGAEETA 451
AD +R+ + L KAI T + ++ + V + + +++ + +
Sbjct: 647 ADATRQISALVKAIQTDTQDAVGAMERSTQGVVEGAKLSDNAGTALSEIDRVSRRLADLI 706
Query: 452 TQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKEN 506
Q++++A++ A++A+ +A +Q E T EG + E + +EE++ +
Sbjct: 707 EQISQSASREADSANVVAANIQHIFAVTEQTGEGTRTTAQQVRELSQMAEELRRS 761