Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  129 bits (324), Expect = 5e-34
 Identities = 73/277 (26%), Positives = 148/277 (53%), Gaps = 7/277 (2%)

Query: 440 VEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKS 499
           + D + G ++   Q+++AATQ+A ++ D   ++ +  EE +       ++ +  +E  ++
Sbjct: 365 LRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMNQMSATVQEVAQN 424

Query: 500 SEEIK-------ENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLI 552
           +E+         + ++ G + V  AI R++ +   +D    +++ L  + ++I  +  +I
Sbjct: 425 AEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGSILDVI 484

Query: 553 KDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRI 612
           K ++EQT LLALNA+IEAARAG+AG+GFAVVA E++ LA+    + E+I   I+ ++   
Sbjct: 485 KSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQLIDSLHNGT 544

Query: 613 DDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGAL 672
           D+   L    K   ++ V        AL +I ++V+        I   ++  S   E   
Sbjct: 545 DEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEEQSVVAEQIN 604

Query: 673 KNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGI 709
           ++   +  +S++ +A +E+  AS+ EL  + +++RG+
Sbjct: 605 RSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGM 641



 Score = 33.1 bits (74), Expect = 5e-05
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 17/125 (13%)

Query: 395 FTARADESRENNNLEKAINTAVSNVADLIKELR---EEVELL-----NIQIQKVE----- 441
           F   ADE R    L +  +TA   +  LI  L    +EV  L     ++  Q VE     
Sbjct: 512 FAVVADEVR---GLAQRTSTATEEIGQLIDSLHNGTDEVTRLLDSSKSLTEQSVELSRRA 568

Query: 442 -DELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSS 500
              L    +T + +     Q+A A+ +QS   ++ +  + N  + + +  +A+E+T  SS
Sbjct: 569 GHALSQITDTVSSIQGMNQQIATASEEQSVVAEQINRSVINVRDVSDQTSAASEQTAASS 628

Query: 501 EEIKE 505
            E+++
Sbjct: 629 GELEQ 633